Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31935
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   1.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   3.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   3.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   4.9  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   6.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.6  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   8.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.6  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.6  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 452 RAKSLAPLDTIYSYSYGEPIP 514
           RA+     +  ++Y YG+PIP
Sbjct: 230 RARRKEIAEIAFAYKYGDPIP 250


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 415 SVGANSTGLIFESLGCFGAQEVIDG 341
           S G N  G I  SLG  G++ V  G
Sbjct: 213 SFGTNLVGGIVRSLGTLGSRVVESG 237


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 378 LSKMRPVEFAPTLRL*STGLALW 446
           LS++R +E A  LRL    + +W
Sbjct: 142 LSRLRRIEIATCLRLSEKQVKIW 164


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -3

Query: 244 HIRVRHESSYRPRCRTVNQF 185
           ++++ H+  YR  CR +  F
Sbjct: 25  YLKIYHKEKYRKFCRILKYF 44


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -2

Query: 164 RNRCTGYDSTGAETIGSTLKTEASRCRWTCRAD 66
           + RCT        TI   L T+ ++C    +A+
Sbjct: 48  KGRCTPEGKKLKSTIPEALSTDCAKCNEKVKAN 80


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 378 LSKMRPVEFAPTLRL*STGLALW 446
           L++ R +E A +LRL    + +W
Sbjct: 208 LTRRRRIEIAESLRLTERQIKIW 230


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 80  TCRADASCRSHSRIP 36
           +C AD SC S  + P
Sbjct: 115 SCHADKSCASDDKSP 129


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 296 LDRIAYRRRPALAISAVDD 352
           +D I+Y   PA  IS  DD
Sbjct: 528 IDEISYMAPPAPLISQYDD 546


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 487 VDGVEWC*GLGARHHRASPVDQSRSVGANST 395
           V+ +  C G  AR  ++SP     +  ANST
Sbjct: 7   VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 487 VDGVEWC*GLGARHHRASPVDQSRSVGANST 395
           V+ +  C G  AR  ++SP     +  ANST
Sbjct: 7   VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 487 VDGVEWC*GLGARHHRASPVDQSRSVGANST 395
           V+ +  C G  AR  ++SP     +  ANST
Sbjct: 7   VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 378 LSKMRPVEFAPTLRL*STGLALW 446
           L++ R +E A +LRL    + +W
Sbjct: 208 LTRRRRIEIAESLRLTERQIKIW 230


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 487 VDGVEWC*GLGARHHRASPVDQSRSVGANST 395
           V+ +  C G  AR  ++SP     +  ANST
Sbjct: 7   VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 487 VDGVEWC*GLGARHHRASPVDQSRSVGANST 395
           V+ +  C G  AR  ++SP     +  ANST
Sbjct: 7   VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 487 VDGVEWC*GLGARHHRASPVDQSRSVGANST 395
           V+ +  C G  AR  ++SP     +  ANST
Sbjct: 7   VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 378 LSKMRPVEFAPTLRL*STGLALW 446
           L++ R +E A +LRL    + +W
Sbjct: 208 LTRRRRIEIAESLRLTERQIKIW 230


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 487 VDGVEWC*GLGARHHRASPVDQSRSVGANST 395
           V+ +  C G  AR  ++SP     +  ANST
Sbjct: 7   VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 487 VDGVEWC*GLGARHHRASPVDQSRSVGANST 395
           V+ +  C G  AR  ++SP     +  ANST
Sbjct: 7   VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,558
Number of Sequences: 336
Number of extensions: 2081
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)