Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31935
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127398-1|BAC86959.1|  719|Homo sapiens protein ( Homo sapiens ...    31   2.4  
BC045743-1|AAH45743.1|  400|Homo sapiens ring finger protein 149...    30   4.2  
BC032328-1|AAH32328.2|  400|Homo sapiens ring finger protein 149...    30   4.2  
BC019355-1|AAH19355.2|  400|Homo sapiens ring finger protein 149...    30   4.2  
AY450390-1|AAR21083.1|  400|Homo sapiens DNA polymerase-transact...    30   4.2  
AK075141-1|BAC11430.1|  400|Homo sapiens protein ( Homo sapiens ...    30   4.2  
AK074985-1|BAC11334.1|  400|Homo sapiens protein ( Homo sapiens ...    30   4.2  
AC013722-2|AAY15089.1|  163|Homo sapiens unknown protein.              30   4.2  
BC112225-1|AAI12226.1|  470|Homo sapiens torsin A interacting pr...    30   5.5  
BC101532-1|AAI01533.1|  470|Homo sapiens torsin A interacting pr...    30   5.5  
AL359853-2|CAH70382.1|  470|Homo sapiens torsin A interacting pr...    30   5.5  
AF464140-1|AAM50514.1|  470|Homo sapiens hypothetical protein pr...    30   5.5  
BC129993-1|AAI29994.1| 1139|Homo sapiens otoancorin protein.           29   9.7  
BC129992-1|AAI29993.1| 1138|Homo sapiens OTOA protein protein.         29   9.7  

>AK127398-1|BAC86959.1|  719|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45489 fis, clone BRTHA2005448, highly  similar
           to Mus musculus calpain 12 (Capn12). ).
          Length = 719

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 276 HPWSSVSWTESLTDAAQHWPSLPSMTSCAPKQPRLSKMRPVEFAPTLR 419
           +PW  V WT + +D+   W +LP  T C  +   L K    EF   LR
Sbjct: 283 NPWGCVEWTGAWSDSCPRWDTLP--TEC--RDALLVKKEDGEFWMELR 326


>BC045743-1|AAH45743.1|  400|Homo sapiens ring finger protein 149
           protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 446 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 327
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>BC032328-1|AAH32328.2|  400|Homo sapiens ring finger protein 149
           protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 446 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 327
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>BC019355-1|AAH19355.2|  400|Homo sapiens ring finger protein 149
           protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 446 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 327
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>AY450390-1|AAR21083.1|  400|Homo sapiens DNA
           polymerase-transactivated protein 2 protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 446 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 327
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>AK075141-1|BAC11430.1|  400|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90660 fis, clone PLACE1004887, weakly similar to
           GOLIATH PROTEIN. ).
          Length = 400

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 446 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 327
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>AK074985-1|BAC11334.1|  400|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90504 fis, clone NT2RP3004090, weakly similar to
           GOLIATH PROTEIN. ).
          Length = 400

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 446 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 327
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>AC013722-2|AAY15089.1|  163|Homo sapiens unknown protein.
          Length = 163

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 446 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 327
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 123 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 162


>BC112225-1|AAI12226.1|  470|Homo sapiens torsin A interacting
           protein 2 protein.
          Length = 470

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -2

Query: 254 RDAAHQGTSRVELPTEMSDGKSVQ---PARASARNRCTGYDSTGAE 126
           R  AH G+S V LP E SDG       P   S   +  G+ S G E
Sbjct: 127 RADAHLGSSSVALPKEASDGTGASQEPPTTDSQEAQSPGHSSAGQE 172


>BC101532-1|AAI01533.1|  470|Homo sapiens torsin A interacting
           protein 2 protein.
          Length = 470

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -2

Query: 254 RDAAHQGTSRVELPTEMSDGKSVQ---PARASARNRCTGYDSTGAE 126
           R  AH G+S V LP E SDG       P   S   +  G+ S G E
Sbjct: 127 RADAHLGSSSVALPKEASDGTGASQEPPTTDSQEAQSPGHSSAGQE 172


>AL359853-2|CAH70382.1|  470|Homo sapiens torsin A interacting
           protein 2 protein.
          Length = 470

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -2

Query: 254 RDAAHQGTSRVELPTEMSDGKSVQ---PARASARNRCTGYDSTGAE 126
           R  AH G+S V LP E SDG       P   S   +  G+ S G E
Sbjct: 127 RADAHLGSSSVALPKEASDGTGASQEPPTTDSQEAQSPGHSSAGQE 172


>AF464140-1|AAM50514.1|  470|Homo sapiens hypothetical protein
           protein.
          Length = 470

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -2

Query: 254 RDAAHQGTSRVELPTEMSDGKSVQ---PARASARNRCTGYDSTGAE 126
           R  AH G+S V LP E SDG       P   S   +  G+ S G E
Sbjct: 127 RADAHLGSSSVALPKEASDGTGASQEPPTTDSQEAQSPGHSSAGQE 172


>BC129993-1|AAI29994.1| 1139|Homo sapiens otoancorin protein.
          Length = 1139

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = -3

Query: 361 AQEVIDGRDGQCWAASVSDSVQLTEDHGWADPDPHHVMRHIRVRHESSYRPRCRTVNQFS 182
           A+E+IDG     +  ++ D +Q    H W D   H V+ ++  R+ +   P  +   +  
Sbjct: 40  AEEIIDGS----YLNALLDLIQFQSSHVWTDDLSHRVLAYLNSRNVAFTIPSLQAAVENH 95

Query: 181 LREPRH 164
           L +  H
Sbjct: 96  LEQRLH 101


>BC129992-1|AAI29993.1| 1138|Homo sapiens OTOA protein protein.
          Length = 1138

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = -3

Query: 361 AQEVIDGRDGQCWAASVSDSVQLTEDHGWADPDPHHVMRHIRVRHESSYRPRCRTVNQFS 182
           A+E+IDG     +  ++ D +Q    H W D   H V+ ++  R+ +   P  +   +  
Sbjct: 39  AEEIIDGS----YLNALLDLIQFQSSHVWTDDLSHRVLAYLNSRNVAFTIPSLQAAVENH 94

Query: 181 LREPRH 164
           L +  H
Sbjct: 95  LEQRLH 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,592,763
Number of Sequences: 237096
Number of extensions: 1470569
Number of successful extensions: 4714
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4713
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)