BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV31927 (464 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_1308| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29) 29 1.4 SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 1.9 SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) 29 1.9 SB_35197| Best HMM Match : SAP (HMM E-Value=3.2) 27 5.8 >SB_1308| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29) Length = 352 Score = 29.5 bits (63), Expect = 1.4 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -2 Query: 238 KKMIKLSLIIQKFFIMWYSPYCSLFYHVR*ELLPHL 131 +K IK++ +I F+M Y PY +F + +++P L Sbjct: 244 RKFIKMTFMIMVLFVMCYLPYQIVFLLIHFDVVPGL 279 >SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) Length = 869 Score = 29.1 bits (62), Expect = 1.9 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 Query: 242 GKKNDKIESHHSEVLYNVVFSLLFSILPRKIGATSSSSRAVAI 114 GK + IE H + N+ + PR+ +TSS+S AVA+ Sbjct: 283 GKNSANIEYHCDKETTNITMETTNAHAPRRTPSTSSTSSAVAL 325 >SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) Length = 260 Score = 29.1 bits (62), Expect = 1.9 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = -1 Query: 188 VFSLLFSILPRKIGATSSSSRAVAIKANSIYPCS-QH*HVRSEYPSHSHLVTYT 30 +FS++ SI+ A+S+SS + + S+ S QH H R + H H + Y+ Sbjct: 26 IFSVI-SIITASSSASSTSSTSPSASVYSVSSASLQHLHQRHRHHQHHHQLQYS 78 >SB_35197| Best HMM Match : SAP (HMM E-Value=3.2) Length = 323 Score = 27.5 bits (58), Expect = 5.8 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = -1 Query: 152 IGATSSSSRAVAIKANSIYPCSQH*HVRSEYPSHSHLVTY-----TPTL 21 I ++SSSS A A ++S S H H + H H Y TPTL Sbjct: 185 ITSSSSSSAAAASSSSSSSSSSSHHHYHRHHLHHHHKALYKLRQHTPTL 233 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,001,739 Number of Sequences: 59808 Number of extensions: 233394 Number of successful extensions: 488 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 440 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 488 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 957531822 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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