Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31927
         (464 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   0.70 
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   8.6  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   8.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 60  PVPFTSRYVYTDLKLA 13
           PVP  +R + TDLKLA
Sbjct: 413 PVPLIAREIKTDLKLA 428


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 196 IMWYSPY 176
           IMWYSP+
Sbjct: 283 IMWYSPF 289


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 99  DRIGFNCYCSTR*GSS 146
           DR+GF  +C T  G++
Sbjct: 262 DRLGFLTFCPTNLGTT 277


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 241 PNAKIMFCFTGKYRHQD 291
           P  K  FC  GK  H D
Sbjct: 423 PLDKCYFCLDGKLPHDD 439


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,376
Number of Sequences: 438
Number of extensions: 2402
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)