Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31925
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0127 - 25845253-25845351,25845506-25845569,25845962-258461...    29   1.7  
01_06_1287 + 36004909-36006279                                         29   2.9  
01_06_0766 - 31820168-31820509,31821898-31822110,31822330-318224...    28   5.1  
03_01_0074 + 610948-611184,611745-611867,611983-612082,612167-61...    27   8.9  
03_01_0050 + 430744-431337,432131-432249,432539-433084,433177-43...    27   8.9  

>05_06_0127 -
           25845253-25845351,25845506-25845569,25845962-25846109,
           25846224-25846486,25847065-25847209,25847300-25847639
          Length = 352

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 282 CPLRTCSALRR*YNPQHRGSWPPLI 208
           CP   CSA     NPQ RG+ PP++
Sbjct: 145 CPSPPCSAAAHSSNPQGRGAIPPVV 169


>01_06_1287 + 36004909-36006279
          Length = 456

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 53  HTRGPTTSKVYRYLHSFETRYASFCHLLSSVYIAIHTGEDRQEWRRIIQEKVIR 214
           H        V +++H+ + +  S   LLS+VY A  + +D    RR I+EK ++
Sbjct: 355 HWNRELAKSVAKHIHALDPKDTSSYILLSNVYSAAGSWQDVSMIRREIKEKGLK 408


>01_06_0766 -
           31820168-31820509,31821898-31822110,31822330-31822473,
           31822759-31822797,31822834-31822932,31823024-31823113
          Length = 308

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +2

Query: 77  KVYRYLHSFETRYASFCHLLSSVYIAIHTGEDRQEWRRIIQ 199
           +VY  L SF      F   L +V  A+ T ED +EW+RIIQ
Sbjct: 86  EVYGALDSFVAWELEFP--LIAVKKALKTLEDEKEWKRIIQ 124


>03_01_0074 +
           610948-611184,611745-611867,611983-612082,612167-612213,
           612292-612450,613033-613132,613209-613300,613390-614532,
           614949-615041,615408-615493,615746-615873,615965-616086,
           616202-616270,616380-616518,616624-616686,616887-616930,
           617339-617425
          Length = 943

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 41  YPRGHTRGPTTSKVYRYL-HSFETRYASFCHL 133
           YPR HTRG + ++ YR L +SF+    ++ HL
Sbjct: 511 YPRNHTRGVSRTERYRALGNSFQVDTVAY-HL 541


>03_01_0050 +
           430744-431337,432131-432249,432539-433084,433177-433483,
           433605-433773,433861-433960,435805-436103,436796-436869,
           437007-437442,437622-437650
          Length = 890

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 425 SKTISQDIRSSAHIVCSFQGVVLYTRLVDQWS 330
           S T+  D+R+  H  CS       +R++ QW+
Sbjct: 6   SNTMEPDLRAKDHRACSASATDTSSRIIAQWA 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,179,891
Number of Sequences: 37544
Number of extensions: 257797
Number of successful extensions: 487
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)