Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31924
         (405 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.33 
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               24   0.75 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.3  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.33
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +2

Query: 218  LERAGD**ETGAQDQGRLRRL---REEHPGGDQED 313
            + RAG   E   +D  +L R    RE H GG QED
Sbjct: 1403 ISRAGSRDEDSTRDSTKLDRSSREREVHNGGQQED 1437


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +3

Query: 63  LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES-QKLAKKVSSNVQETN 239
           +EQ  QN++   +     H  ++KNA    +K    +  ++Q+S +KL  K  S   E  
Sbjct: 48  MEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPRSMQDSTKKLFNKCKSIQNEDP 107

Query: 240 EKLAPKIKAAYDDF 281
            + A ++   Y +F
Sbjct: 108 CEKAYQLVKCYVEF 121


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 87  RCSASTVPKPPWPCRSRLRALPGDS 13
           R S S  P+PP   R R    P DS
Sbjct: 556 RASLSKTPQPPQCPRFRKLDSPSDS 580



 Score = 20.6 bits (41), Expect = 7.0
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 102 ELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 242
           EL K  PD+    T   EKL  A + T Q+ Q  A++     Q+  +
Sbjct: 387 ELLKKIPDLRTLNTLHSEKL-LAFKMTEQQQQMQAQQQHQQQQQQTQ 432


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,498
Number of Sequences: 438
Number of extensions: 1159
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)