Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31922
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   0.075
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   0.075
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   0.075
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   0.075
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.075
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 149 NRRFDNQGCXRIMTEELDRLQR*QPNWSYEIVHNH 253
           NRR D++    + TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDEA--DVKTEDLDEIQKEKGDEYYETISNH 545


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.075
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 149 NRRFDNQGCXRIMTEELDRLQR*QPNWSYEIVHNH 253
           NRR D++    + TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDEA--DVKTEDLDEIQKEKGDEYYETISNH 545


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.075
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 149 NRRFDNQGCXRIMTEELDRLQR*QPNWSYEIVHNH 253
           NRR D++    + TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDEA--DVKTEDLDEIQKEKGDEYYETISNH 545


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.075
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 149 NRRFDNQGCXRIMTEELDRLQR*QPNWSYEIVHNH 253
           NRR D++    + TE+LD +Q+ + +  YE + NH
Sbjct: 513 NRRRDDEA--DVKTEDLDEIQKEKGDEYYETISNH 545


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 248 CERFHNSNLAVTVAV 204
           C++F  SN+ V +A+
Sbjct: 350 CDKFERSNIGVKIAL 364


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 248 CERFHNSNLAVTVAV 204
           C++F  SN+ V +A+
Sbjct: 350 CDKFERSNIGVKIAL 364


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 223 KLEL*NRSQPPRVELGS 273
           KL+  N  +PP  ELG+
Sbjct: 448 KLKTANNKRPPSTELGT 464


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = -2

Query: 170 LDYQIFDFVHIIVRXYXEITAFAVVFSRLRVKFTHEAFTFLK 45
           + YQIFD+V         +  F  +F+        E    LK
Sbjct: 788 MGYQIFDWVQKEQSLAHSVGVFLTIFNAAHCYLATELVLMLK 829


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,229
Number of Sequences: 336
Number of extensions: 1373
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)