Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31922
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    93   2e-21

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 93.1 bits (221), Expect = 2e-21
 Identities = 59/166 (35%), Positives = 80/166 (48%)
 Frame = +3

Query: 15  GWSFXEVLPYFKKSESFMGKFDAEATKYHSKGGYLXVXSDDNMHEIEDLIIKAAXEL*LK 194
           GWS+ EV+PY+ KSE+   +     TKYH  GG + V            I+KAA E    
Sbjct: 179 GWSWDEVMPYYLKSENNT-ELSRVGTKYHRSGGLMNVERFPYQPPFAWKILKAAEEAGFG 237

Query: 195 NLTDCNGDSQIGVMXXXXXXXXXXXXXXXXXXLSPIXDRKNLHVIKNAIATKIVFKPGXN 374
              D +GD   G                    ++P  +R NLHVI NA  TK+       
Sbjct: 238 VSEDLSGDRINGFTVAQTISRNGVRLSSARAFITPFENRSNLHVIVNATVTKVRTLNKRA 297

Query: 375 IXSGXLXNKGGRDIAVNVXKEVVVSAGAINSPQLLXLSGIGPRKHL 512
                L N  GR   +   +EV++SAG++N+PQLL LSGIGP++HL
Sbjct: 298 TGVNVLIN--GRRRIIFARREVILSAGSVNTPQLLMLSGIGPKEHL 341


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,952
Number of Sequences: 438
Number of extensions: 1353
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)