Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31922
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g51950.1 68418.m06447 glucose-methanol-choline (GMC) oxidored...    46   2e-05
At5g51930.1 68418.m06442 glucose-methanol-choline (GMC) oxidored...    46   2e-05
At1g73050.1 68414.m08447 (R)-mandelonitrile lyase, putative / (R...    44   8e-05
At1g72970.1 68414.m08439 glucose-methanol-choline (GMC) oxidored...    43   1e-04
At3g56060.1 68416.m06229 glucose-methanol-choline (GMC) oxidored...    43   1e-04
At1g14190.1 68414.m01679 glucose-methanol-choline (GMC) oxidored...    42   2e-04
At1g14185.1 68414.m01678 glucose-methanol-choline (GMC) oxidored...    42   2e-04
At1g12570.1 68414.m01459 glucose-methanol-choline (GMC) oxidored...    38   0.003

>At5g51950.1 68418.m06447 glucose-methanol-choline (GMC)
           oxidoreductase family protein similar to mandelonitrile
           lyase from Prunus serotina [SP|P52706, SP|P52707];
           contains Pfam profile PF00732 GMC oxidoreductase
          Length = 586

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = +3

Query: 411 DIAVNVXKEVVVSAGAINSPQLLXLSGIGPRKHL 512
           ++  N   EV++SAGAI SPQLL LSGIGP  HL
Sbjct: 264 ELEKNSMNEVILSAGAIGSPQLLMLSGIGPAAHL 297


>At5g51930.1 68418.m06442 glucose-methanol-choline (GMC)
           oxidoreductase family protein similar to mandelonitrile
           lyase from Prunus serotina [SP|P52706, SP|P52707];
           contains Pfam profile PF00732 GMC oxidoreductase
          Length = 582

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +3

Query: 411 DIAVNVXKEVVVSAGAINSPQLLXLSGIGPRKHLE 515
           ++A     EV++SAGA+ SPQLL LSG+GP  HLE
Sbjct: 285 NLANKATNEVILSAGALGSPQLLMLSGVGPAVHLE 319


>At1g73050.1 68414.m08447 (R)-mandelonitrile lyase, putative /
           (R)-oxynitrilase, putative similar to mandelonitrile
           lyase from Prunus serotina [SP|P52706, SP|52707];
           contains Pfam protile PF00732 GMC oxidoreductase
          Length = 552

 Score = 43.6 bits (98), Expect = 8e-05
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = +3

Query: 435 EVVVSAGAINSPQLLXLSGIGPRKHL 512
           EV++SAGA+ SPQLL LSGIGPR +L
Sbjct: 284 EVILSAGALGSPQLLFLSGIGPRSYL 309


>At1g72970.1 68414.m08439 glucose-methanol-choline (GMC)
           oxidoreductase family protein similar to mandelonitrile
           lyase from Prunus serotina [SP|P52706, SP|P52707];
           contains Pfam profile PF00732 GMC oxidoreductase
          Length = 594

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = +3

Query: 435 EVVVSAGAINSPQLLXLSGIGPRKHLE 515
           EV++S+GAI SPQ+L LSGIGP+K L+
Sbjct: 288 EVILSSGAIGSPQMLMLSGIGPKKELQ 314


>At3g56060.1 68416.m06229 glucose-methanol-choline (GMC)
           oxidoreductase family protein similar to mandelonitrile
           lyase from Prunus serotina [SP|P52706, SP|P52707];
           contains Pfam profile PF00732 GMC oxidoreductase
          Length = 577

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +3

Query: 435 EVVVSAGAINSPQLLXLSGIGPRKHL 512
           EV++SAGAI SPQLL LSG+GP  HL
Sbjct: 274 EVILSAGAIASPQLLMLSGVGPAAHL 299


>At1g14190.1 68414.m01679 glucose-methanol-choline (GMC)
           oxidoreductase family protein similar to mandelonitrile
           lyase from Prunus serotina [SP|P52706, SP|P52707];
           contains Pfam profile PF00732 GMC oxidoreductase
          Length = 501

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = +3

Query: 435 EVVVSAGAINSPQLLXLSGIGPRKHLE 515
           EV+++AGA+ SPQ+L LSGIGP  HL+
Sbjct: 243 EVILAAGALGSPQILLLSGIGPENHLK 269


>At1g14185.1 68414.m01678 glucose-methanol-choline (GMC)
           oxidoreductase family protein similar to mandelonitrile
           lyase from Prunus serotina [SP|P52706, SP|P52707];
           contains Pfam profile PF00732 GMC oxidoreductase
          Length = 503

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +3

Query: 435 EVVVSAGAINSPQLLXLSGIGPRKHL 512
           EV+++AGA+ SPQ+L LSGIGP  HL
Sbjct: 263 EVILAAGALGSPQILLLSGIGPENHL 288


>At1g12570.1 68414.m01459 glucose-methanol-choline (GMC)
           oxidoreductase family protein similar to mandelonitrile
           lyase from Prunus serotina [SP|P52706, SP|P52707];
           contains Pfam profile PF00732 GMC oxidoreductase
          Length = 572

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = +3

Query: 435 EVVVSAGAINSPQLLXLSGIGPRKHLE 515
           E+++SAG + SPQLL LSG+GP   L+
Sbjct: 272 EIILSAGTLGSPQLLMLSGVGPSAQLQ 298


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,554,705
Number of Sequences: 28952
Number of extensions: 122635
Number of successful extensions: 223
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)