Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31920
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0418 - 3211687-3211933,3212016-3212164,3212443-3212551,321...    29   2.2  
02_04_0367 + 22399785-22399899,22400911-22401102,22401990-224021...    28   5.1  
07_01_0546 - 4024282-4024291,4024486-4024550,4024739-4024904,402...    27   6.8  
04_01_0125 - 1317328-1318049,1318061-1319035,1320994-1321143,132...    27   6.8  

>03_01_0418 -
           3211687-3211933,3212016-3212164,3212443-3212551,
           3212650-3212840,3212967-3213102,3213216-3213716,
           3213819-3213923,3214008-3214095,3214195-3214266,
           3214692-3214762,3215726-3216008,3216388-3216463
          Length = 675

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 36  WCATIDFASALSCRNCRSYDPVRAWSRRLE*DRIRIQ 146
           W   +++  ALS R+ ++   +R W   LE D++RI+
Sbjct: 512 WLGDLNYRIALSYRSVKALVEMRNWKALLEKDQLRIE 548


>02_04_0367 +
           22399785-22399899,22400911-22401102,22401990-22402117,
           22402229-22402384,22402948-22403206,22403762-22403836,
           22404288-22404610,22405041-22405274,22405355-22405542,
           22405734-22405869,22405963-22406071,22406988-22407090,
           22407188-22407374,22407467-22407565,22407666-22407724,
           22408581-22408686,22408798-22408962
          Length = 877

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +1

Query: 229 VFTLLVLIVNFRKADFLSISISSTNALYRYVSHLS*MPFLM 351
           +FT+L  +  F   +F SI+    +++YR+++  S  PFLM
Sbjct: 734 LFTILFNVAFFGTGNFASIASFEISSVYRFITIFS--PFLM 772


>07_01_0546 -
           4024282-4024291,4024486-4024550,4024739-4024904,
           4025012-4025160,4025332-4025440,4025532-4025725,
           4025839-4025974,4026123-4026623,4026709-4026813,
           4027023-4027113,4027325-4027411,4028038-4028128,
           4028307-4028336
          Length = 577

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 36  WCATIDFASALSCRNCRSYDPVRAWSRRLE*DRIRIQ 146
           W   +++  ALS  + R+   +  W + LE D++RIQ
Sbjct: 416 WLGDLNYRIALSYCSARALVEMHNWKQLLEKDQLRIQ 452


>04_01_0125 -
           1317328-1318049,1318061-1319035,1320994-1321143,
           1322242-1322546,1323447-1323565
          Length = 756

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 121 WNKIASESNGF*LSLGNELDFLDTVDMEA 207
           W  + + S GF L  GN +DFLDT ++ A
Sbjct: 301 WMLLYNVSLGFLLLRGNSMDFLDTGNLGA 329


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,253,960
Number of Sequences: 37544
Number of extensions: 221289
Number of successful extensions: 446
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)