Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31919
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.6  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   3.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   3.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   4.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 224 GEDCSLYPYSTCYLPRLLTQPSTRWSVRPLNWEASY 331
           G D SLY ++  Y  + L  PS    +R +  E  Y
Sbjct: 161 GSDGSLYNHTANYDSKYLVLPSGELHIRDVGPEDGY 196


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
 Frame = +1

Query: 340 ISLTV---IIIETTGQISNALPIMIT 408
           +SLTV   ++ ET  Q+S+A+P++ T
Sbjct: 251 LSLTVFLNLVAETLPQVSDAIPLLGT 276


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
 Frame = +1

Query: 340 ISLTV---IIIETTGQISNALPIMIT 408
           +SLTV   ++ ET  Q+S+A+P++ T
Sbjct: 251 LSLTVFLNLVAETLPQVSDAIPLLGT 276


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
 Frame = +1

Query: 340 ISLTV---IIIETTGQISNALPIMIT 408
           +SLTV   ++ ET  Q+S+A+P++ T
Sbjct: 251 LSLTVFLNLVAETLPQVSDAIPLLGT 276


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 155 RRGRSVWPFPAVCSYRTC*PAPRGE 229
           R GR V P      + +C P P G+
Sbjct: 340 RTGRKVSPRVNTIKHTSCIPTPNGD 364


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 155 RRGRSVWPFPAVCSYRTC*PAPRGE 229
           R GR V P      + +C P P G+
Sbjct: 340 RTGRKVSPRVNTIKHTSCIPTPNGD 364


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 403 ITLVVAQMDRRFLQ*RYLRYIH 468
           IT ++A + R+F   RY+ Y H
Sbjct: 11  ITEIIADIYRQFPTDRYVGYYH 32


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 124 LVFVVCYFL 150
           LVFV CYF+
Sbjct: 143 LVFVFCYFI 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,214
Number of Sequences: 336
Number of extensions: 2503
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)