Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31919
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0783 - 27662178-27662237,27662659-27662700,27662791-276628... 81 5e-16
04_04_1356 + 32854585-32854832,32854948-32855148,32855270-328554... 74 6e-14
12_02_0156 - 14532000-14532098,14532669-14534330,14534445-145346... 74 8e-14
02_04_0236 - 21170753-21170794,21171089-21172220,21172332-211726... 73 1e-13
08_02_0099 + 12343518-12343678,12344193-12344393,12344669-123448... 69 3e-12
01_06_1528 + 38011391-38011635,38012366-38012566,38012659-380128... 68 5e-12
08_02_1620 - 28288152-28288353,28288469-28288557,28288634-282888... 31 0.73
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 30 0.96
09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287... 29 2.9
06_02_0182 - 12702890-12703387 29 2.9
05_01_0604 + 5405947-5406687 28 3.9
02_05_0553 - 29918289-29918361,29918505-29918617,29918694-299188... 28 3.9
09_01_0015 + 370242-370306,370429-370497,371087-371161,371558-37... 27 8.9
02_04_0610 + 24335153-24337724,24337835-24338256 27 8.9
>03_05_0783 -
27662178-27662237,27662659-27662700,27662791-27662892,
27662991-27663147,27663230-27663307,27663391-27663446,
27663557-27663634,27663736-27663867,27663943-27664078,
27664252-27664403,27665317-27665391,27665476-27665535,
27665865-27665944,27666392-27666462,27666549-27666689,
27667467-27667555,27668657-27668731,27669303-27669401,
27669526-27669572,27669654-27669875,27671485-27671557,
27671650-27671823
Length = 732
Score = 81.0 bits (191), Expect = 5e-16
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Frame = +1
Query: 1 LQLYC-EXGEYNALAAIWFQTPEASVRS-FLHDPMGSYKPWSILVFVVCYFLLSTWTFGL 174
++ YC + EYN LA I+F T + ++R+ F Y S++ F+V ++ L+ TFG
Sbjct: 356 VKFYCSKDNEYNDLATIFFNTQDDAIRNLFSAKTFHEYSAQSLITFLVMFYSLAVVTFGT 415
Query: 175 AVSSGLFIPNLLTGAAWGRLLAISIQYMLPSKTINPAKYXXXXXXXXXXXXXRMTISLTV 354
AV +G F+P ++ G+ +GRL+ + + + Y RMT+SL V
Sbjct: 416 AVPAGQFVPGIMIGSTYGRLVGMFVVKFYKKLNVEEGTYALLGAASFLGGSMRMTVSLCV 475
Query: 355 IIIETTGQISNALPIMITLVVAQ 423
I++E T + IM+ L++++
Sbjct: 476 IMVEITNNLKLLPLIMLVLLISK 498
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 422 KWIGDFFNEGIYDIYIQLAGVPLLPWEP 505
K +GDFFNEG+Y++ QL G+PLL P
Sbjct: 498 KAVGDFFNEGLYEVQAQLRGIPLLDSRP 525
>04_04_1356 +
32854585-32854832,32854948-32855148,32855270-32855447,
32856389-32856651,32856800-32857040,32857317-32858456,
32858856-32858993
Length = 802
Score = 74.1 bits (174), Expect = 6e-14
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Frame = +1
Query: 13 CEXGEYNALAAIWFQTPEASVRS-FLHDPMGSYKPWSILVFVVCYFLLSTWTFGLAVSSG 189
C EYN LA+++F T + ++R+ + + SILVF + L +++GLA+ SG
Sbjct: 436 CAMNEYNDLASLFFNTNDDTIRNLYSAGTDDEFHISSILVFFFTSYFLGIFSYGLALPSG 495
Query: 190 LFIPNLLTGAAWGRLLAISIQYMLPSKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIET 369
LF+P +LTGA +GRL+ + I T++ + RMT+S+ V+I+E
Sbjct: 496 LFVPVILTGATYGRLVGMLIG---SQSTLDHGLFAVLGSAALLGGSMRMTVSVCVVILEL 552
Query: 370 TGQISNALPIMITLVVAQ 423
T + +M+ L++++
Sbjct: 553 TNNLLMLPLVMLVLLISK 570
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 422 KWIGDFFNEGIYDIYIQLAGVPLLPWEPXP 511
K + D FN IYD+ ++L G P L P
Sbjct: 570 KTVADAFNANIYDLLVKLKGFPYLEGHVEP 599
>12_02_0156 -
14532000-14532098,14532669-14534330,14534445-14534660,
14534730-14534907,14535065-14535276
Length = 788
Score = 73.7 bits (173), Expect = 8e-14
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Frame = +1
Query: 13 CEXGEYNALAAIWFQTPEASVRS-FLHDPMGSYKPWSILVFVVCYFLLSTWTFGLAVSSG 189
C G YN LA + T + R+ F G ++ S+L+F Y +L +TFG+AV SG
Sbjct: 435 CPEGHYNDLATLLHATNVDATRNIFSTGTAGEFRLDSLLIFFAVYCVLGLFTFGIAVPSG 494
Query: 190 LFIPNLLTGAAWGRLLAISIQYMLPSKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIET 369
LF+P +L G+A+GR+ A+ + I+ Y RMT+SL VI +E
Sbjct: 495 LFLPIILMGSAYGRVTALVLSRF---ARIDHGLYAVLGAAALMSGSMRMTVSLVVIFLEL 551
Query: 370 TGQISNALPI-MITLVVAQ 423
T + LPI M L++A+
Sbjct: 552 TNNLL-LLPITMFVLLIAK 569
Score = 34.7 bits (76), Expect = 0.045
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 422 KWIGDFFNEGIYDIYIQLAGVPLLPWEPXP 511
K +GD FN IY+I + L G+P L +P P
Sbjct: 569 KTVGDAFNPSIYEIILDLKGLPFLEAKPEP 598
>02_04_0236 -
21170753-21170794,21171089-21172220,21172332-21172601,
21173043-21173305,21173406-21173492,21174149-21174326,
21174784-21174984,21175769-21176025
Length = 809
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Frame = +1
Query: 13 CEXGEYNALAAIWFQTPEASVRS-FLHDPMGSYKPWSILVFVVCYFLLSTWTFGLAVSSG 189
C G YN LA+++F T + ++R+ F + + ++ +F + L T+G+AV SG
Sbjct: 474 CPPGHYNDLASLFFNTNDDAIRNLFSNGTESEFHMSTLFIFFTAVYCLGILTYGVAVPSG 533
Query: 190 LFIPNLLTGAAWGRLLAISIQYMLPSKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIET 369
LFIP +L GA +GR++ + + ++P + RMT+S+ VI++E
Sbjct: 534 LFIPVILAGATYGRIVGTLLGSI---SDLDPGLFALLGAASFLGGTMRMTVSVCVILLEL 590
Query: 370 TGQISNALPIMITLVVAQ 423
T ++ +M+ L++++
Sbjct: 591 TNDLAMLPLVMLVLLISK 608
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 422 KWIGDFFNEGIYDIYIQLAGVPLLPWEPXP 511
K I D FN+G+YD + + G+P + P
Sbjct: 608 KTIADNFNKGVYDQIVVMKGLPYMEAHAEP 637
>08_02_0099 +
12343518-12343678,12344193-12344393,12344669-12344846,
12347201-12347463,12347596-12347874,12348045-12349182,
12349303-12349473
Length = 796
Score = 68.5 bits (160), Expect = 3e-12
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Frame = +1
Query: 4 QLYCEXGEYNALAAIWFQTPEASVRSFLHDPMGS-YKPWSILVFVVCYFLLSTWTFGLAV 180
+ +C G YN LA+++ + ++R+ Y P S+L F V + L ++G+
Sbjct: 415 RFHCPAGHYNDLASLFLNINDDAIRNLYSTGTNDVYHPGSMLAFFVASYALGVLSYGVVA 474
Query: 181 SSGLFIPNLLTGAAWGRLLAISIQYMLPSKT-INPAKYXXXXXXXXXXXXXRMTISLTVI 357
SGLF+P +LTGA +GRL+A+ +L ++ ++ RMT+S+ VI
Sbjct: 475 PSGLFVPIILTGATYGRLVAM----LLGGRSGLDHGLVAILGSASFLGGTLRMTVSVCVI 530
Query: 358 IIETTGQISNALPIMITLVVAQ 423
I+E T + +M+ L++++
Sbjct: 531 ILELTNNLLLLPLVMLVLLISK 552
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 422 KWIGDFFNEGIYDIYIQLAGVPLLPWEPXP 511
K + D FN IYD+ + L G+P L P
Sbjct: 552 KTVADSFNSSIYDLILNLKGLPHLDGHAEP 581
>01_06_1528 +
38011391-38011635,38012366-38012566,38012659-38012836,
38012946-38013208,38013380-38013649,38013753-38014950
Length = 784
Score = 67.7 bits (158), Expect = 5e-12
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Frame = +1
Query: 13 CEXGEYNALAAIWFQTPEASVRS-FLHDPMGSYKPWSILVFVVCYFLLSTWTFGLAVSSG 189
C G+YNA+A+++ T + ++R+ F + +L F + L T+G+AV SG
Sbjct: 443 CPPGQYNAMASLFLNTNDDAIRNLFSGGTESEFGVPMLLAFFTAVYSLGLVTYGVAVPSG 502
Query: 190 LFIPNLLTGAAWGRLLAISIQYMLPSKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIET 369
LFIP +L+GA++GRLL + + ++ + RMT+S+ VI++E
Sbjct: 503 LFIPVILSGASFGRLLGKLLGVL---TGLDTGLFALLGAASFLGGTMRMTVSVCVILLEL 559
Query: 370 TGQISNALPIMITLVVAQ 423
T + IM+ L+V++
Sbjct: 560 TNDLLLLPLIMLVLLVSK 577
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 422 KWIGDFFNEGIYDIYIQLAGVPLLPWEPXP 511
K + D FN+G+Y+ +++ G+P L P
Sbjct: 577 KTVADCFNKGVYEQMVRMKGLPYLEAHAEP 606
>08_02_1620 -
28288152-28288353,28288469-28288557,28288634-28288828,
28289082-28289423,28290227-28291672,28292590-28292666,
28293160-28294509,28295921-28296029,28296896-28297007,
28297800-28297957
Length = 1359
Score = 30.7 bits (66), Expect = 0.73
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 240 SEQSSPRGAGQQVRYEQTAGNGQTER-PRREQ 148
+ Q PR GQQ +++Q+AG G T P+++Q
Sbjct: 685 NSQKRPRVQGQQTQFQQSAGQGPTSNIPQQQQ 716
>04_04_1571 +
34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 30.3 bits (65), Expect = 0.96
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 94 PMGSYK-PWSILVFVVCYFLLSTWTFGLAVSSGLFI 198
P G Y+ PWSILV +C F+ ++ F + G +I
Sbjct: 444 PTGLYEEPWSILVEQICKFIYTSPVFHSEIKGGTWI 479
>09_04_0593 -
18825741-18826702,18826994-18827875,18828687-18828775,
18828942-18829080,18829405-18829531,18829629-18829838
Length = 802
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 69 VGTIVP--PRPDGLVQALVYTSVRRMLLPALDV 161
V +VP P P GLV+AL S RR+L P DV
Sbjct: 336 VSVLVPDVPTPAGLVEALGSGSGRRVLCPVPDV 368
>06_02_0182 - 12702890-12703387
Length = 165
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -3
Query: 232 IFPTRRRSAGSV*TNRWKRPDRTSTSRAGSSIRRTLV*TRACTSPSGRGGTIVPTLRAFG 53
+ PTRR S + W T G +R + TR PSG GG+ P+ R G
Sbjct: 28 LIPTRRLSVRRLRARLW-----TLLGILGRCVRSVRLLTRGLVVPSGGGGSTSPSARGKG 82
>05_01_0604 + 5405947-5406687
Length = 246
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 237 EQSSP-RGAGQQVRYEQTAGNGQTERPR 157
+Q +P + GQ YE+T G+G+T P+
Sbjct: 169 QQGAPTKATGQASSYEETTGDGETTNPK 196
>02_05_0553 -
29918289-29918361,29918505-29918617,29918694-29918801,
29918991-29919206,29919284-29919559,29919720-29919824,
29919925-29920379,29920746-29920940,29921237-29921639,
29922006-29922518
Length = 818
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 70 SVRSFLHDPMGSYKP--WSILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAI 243
+V LH + P W + + + G + GL+ P+L+ GAA G +
Sbjct: 439 NVEEILHTGKSASAPGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGG 498
Query: 244 SIQYMLPS 267
S Y++ S
Sbjct: 499 SAGYLINS 506
>09_01_0015 +
370242-370306,370429-370497,371087-371161,371558-371591,
371659-373132,373193-373310,373374-373419
Length = 626
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 345 INGHYYRDDGTDIKRPTHHDHAGRGPNG*AISSMKVSTI 461
++GH+ G+++K+PT H+ G SSM +S I
Sbjct: 491 VSGHFSSGAGSNMKKPTLHEVVGANEVEIRRSSMGLSEI 529
>02_04_0610 + 24335153-24337724,24337835-24338256
Length = 997
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 331 RMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFL 441
R + L + + TG I NAL LV QMD+ FL
Sbjct: 483 RQLVYLKLTSNKLTGNIPNALDRCQNLVTIQMDQNFL 519
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,878,744
Number of Sequences: 37544
Number of extensions: 335555
Number of successful extensions: 938
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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