Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31919
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical pr... 144 4e-35
AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated... 144 4e-35
AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type chlo... 144 4e-35
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 59 2e-09
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 59 2e-09
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 59 2e-09
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 55 3e-08
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 55 3e-08
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 55 3e-08
AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride ... 55 3e-08
U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type chlo... 55 3e-08
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 55 3e-08
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 55 3e-08
AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride ... 55 3e-08
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 54 8e-08
Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical pr... 52 2e-07
D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein. 52 2e-07
AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride ... 50 7e-07
Z68334-2|CAA92728.2| 797|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z54216-10|CAA90949.2| 797|Caenorhabditis elegans Hypothetical p... 46 1e-05
AF173174-1|AAF13167.1| 796|Caenorhabditis elegans CLC chloride ... 46 1e-05
AB035090-1|BAA86959.1| 797|Caenorhabditis elegans clc chloride ... 46 1e-05
Z81576-4|CAB04642.1| 309|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical
protein R07B7.1 protein.
Length = 796
Score = 144 bits (348), Expect = 4e-35
Identities = 67/141 (47%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
Frame = +1
Query: 4 QLYCEXGEYNALAAIWFQTPEASVRSFLHDPMGSYKPWSILVFVVCYFLLSTWTFGLAVS 183
Q++C+ GEY+A+A+++FQ PE SV+S H P+ S+ ++++F + YFLL+ WTFG++V
Sbjct: 435 QMWCKKGEYSAVASLFFQNPEESVKSMFHSPINSFGVTTLVIFGIEYFLLTLWTFGISVP 494
Query: 184 SGLFIPNLLTGAAWGRLLAISIQYMLPSKT-INPAKYXXXXXXXXXXXXXRMTISLTVII 360
SG+FIP +LTGAAWGRL I ++ + PS T I+P KY RMTISLT II
Sbjct: 495 SGVFIPAILTGAAWGRLFGIFVERLFPSVTGIDPGKYALAGAAAQLGGVVRMTISLTAII 554
Query: 361 IETTGQISNALPIMITLVVAQ 423
+E T I+ LPIM+ L+V +
Sbjct: 555 MEATKDITFGLPIMLVLMVTK 575
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 422 KWIGDFFNEGIYDIYIQLAGVPLLPWEP 505
KW+GD FNEG+YD +I LA VP+L W P
Sbjct: 575 KWVGDMFNEGLYDAHIDLAEVPILGWNP 602
>AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated
chloride channelCLH-6 protein.
Length = 796
Score = 144 bits (348), Expect = 4e-35
Identities = 67/141 (47%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
Frame = +1
Query: 4 QLYCEXGEYNALAAIWFQTPEASVRSFLHDPMGSYKPWSILVFVVCYFLLSTWTFGLAVS 183
Q++C+ GEY+A+A+++FQ PE SV+S H P+ S+ ++++F + YFLL+ WTFG++V
Sbjct: 435 QMWCKKGEYSAVASLFFQNPEESVKSMFHSPINSFGVTTLVIFGIEYFLLTLWTFGISVP 494
Query: 184 SGLFIPNLLTGAAWGRLLAISIQYMLPSKT-INPAKYXXXXXXXXXXXXXRMTISLTVII 360
SG+FIP +LTGAAWGRL I ++ + PS T I+P KY RMTISLT II
Sbjct: 495 SGVFIPAILTGAAWGRLFGIFVERLFPSVTGIDPGKYALAGAAAQLGGVVRMTISLTAII 554
Query: 361 IETTGQISNALPIMITLVVAQ 423
+E T I+ LPIM+ L+V +
Sbjct: 555 MEATKDITFGLPIMLVLMVTK 575
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 422 KWIGDFFNEGIYDIYIQLAGVPLLPWEP 505
KW+GD FNEG+YD +I LA VP+L W P
Sbjct: 575 KWVGDMFNEGLYDAHIDLAEVPILGWNP 602
>AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type
chloride channel CLH-6 protein.
Length = 796
Score = 144 bits (348), Expect = 4e-35
Identities = 67/141 (47%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
Frame = +1
Query: 4 QLYCEXGEYNALAAIWFQTPEASVRSFLHDPMGSYKPWSILVFVVCYFLLSTWTFGLAVS 183
Q++C+ GEY+A+A+++FQ PE SV+S H P+ S+ ++++F + YFLL+ WTFG++V
Sbjct: 435 QMWCKKGEYSAVASLFFQNPEESVKSMFHSPINSFGVTTLVIFGIEYFLLTLWTFGISVP 494
Query: 184 SGLFIPNLLTGAAWGRLLAISIQYMLPSKT-INPAKYXXXXXXXXXXXXXRMTISLTVII 360
SG+FIP +LTGAAWGRL I ++ + PS T I+P KY RMTISLT II
Sbjct: 495 SGVFIPAILTGAAWGRLFGIFVERLFPSVTGIDPGKYALAGAAAQLGGVVRMTISLTAII 554
Query: 361 IETTGQISNALPIMITLVVAQ 423
+E T I+ LPIM+ L+V +
Sbjct: 555 MEATKDITFGLPIMLVLMVTK 575
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 422 KWIGDFFNEGIYDIYIQLAGVPLLPWEP 505
KW+GD FNEG+YD +I LA VP+L W P
Sbjct: 575 KWVGDMFNEGLYDAHIDLAEVPILGWNP 602
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 58.8 bits (136), Expect = 2e-09
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Frame = +1
Query: 118 SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLP-------SKTI 276
S++++ + YF+L + V +G+F+P+ + GAA GRL+ ++ + P I
Sbjct: 401 SLVLYYILYFVLVAICISINVPAGVFVPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPI 460
Query: 277 NPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFLQ 444
+P Y T+S++VII E TGQ+S LP++I +++ +FLQ
Sbjct: 461 HPGLYAVVGAAAYTGAVTH-TLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQ 515
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 58.8 bits (136), Expect = 2e-09
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Frame = +1
Query: 118 SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLP-------SKTI 276
S++++ + YF+L + V +G+F+P+ + GAA GRL+ ++ + P I
Sbjct: 432 SLVLYYILYFVLVAICISINVPAGVFVPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPI 491
Query: 277 NPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFLQ 444
+P Y T+S++VII E TGQ+S LP++I +++ +FLQ
Sbjct: 492 HPGLYAVVGAAAYTGAVTH-TLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQ 546
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 58.8 bits (136), Expect = 2e-09
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Frame = +1
Query: 118 SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLP-------SKTI 276
S++++ + YF+L + V +G+F+P+ + GAA GRL+ ++ + P I
Sbjct: 401 SLVLYYILYFVLVAICISINVPAGVFVPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPI 460
Query: 277 NPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFLQ 444
+P Y T+S++VII E TGQ+S LP++I +++ +FLQ
Sbjct: 461 HPGLYAVVGAAAYTGAVTH-TLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQ 515
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 58.8 bits (136), Expect = 2e-09
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Frame = +1
Query: 118 SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLP-------SKTI 276
S++++ + YF+L + V +G+F+P+ + GAA GRL+ ++ + P I
Sbjct: 432 SLVLYYILYFVLVAICISINVPAGVFVPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPI 491
Query: 277 NPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFLQ 444
+P Y T+S++VII E TGQ+S LP++I +++ +FLQ
Sbjct: 492 HPGLYAVVGAAAYTGAVTH-TLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQ 546
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 58.8 bits (136), Expect = 2e-09
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Frame = +1
Query: 118 SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLP-------SKTI 276
S++++ + YF+L + V +G+F+P+ + GAA GRL+ ++ + P I
Sbjct: 401 SLVLYYILYFVLVAICISINVPAGVFVPSFIIGAAGGRLMGETMVVLFPEGMRGPGGPPI 460
Query: 277 NPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFLQ 444
+P Y T+S++VII E TGQ+S LP++I +++ +FLQ
Sbjct: 461 HPGLYAVVGAAAYTGAVTH-TLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQ 515
>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform a protein.
Length = 1050
Score = 55.2 bits (127), Expect = 3e-08
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +1
Query: 121 ILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLPS-KTINPAKYXX 297
+ +FV+ +F+ S +F L V SG+F+P + GAA GR I L I+P Y
Sbjct: 493 LFLFVLVHFIFSIISFTLPVPSGVFLPVFVLGAAIGRFYGEIIGLALEDIHIIHPGIYAI 552
Query: 298 XXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFLQ 444
T+S++V+I E TGQ+ LP+MI+++++ +LQ
Sbjct: 553 VGAAAFSASVTH-TVSVSVMIFEITGQLHFILPVMISVMLSNAVCAYLQ 600
>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform b protein.
Length = 1085
Score = 55.2 bits (127), Expect = 3e-08
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +1
Query: 121 ILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLPS-KTINPAKYXX 297
+ +FV+ +F+ S +F L V SG+F+P + GAA GR I L I+P Y
Sbjct: 493 LFLFVLVHFIFSIISFTLPVPSGVFLPVFVLGAAIGRFYGEIIGLALEDIHIIHPGIYAI 552
Query: 298 XXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFLQ 444
T+S++V+I E TGQ+ LP+MI+++++ +LQ
Sbjct: 553 VGAAAFSASVTH-TVSVSVMIFEITGQLHFILPVMISVMLSNAVCAYLQ 600
>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type
chloride channel CLH-4b protein.
Length = 1084
Score = 55.2 bits (127), Expect = 3e-08
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +1
Query: 121 ILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLPS-KTINPAKYXX 297
+ +FV+ +F+ S +F L V SG+F+P + GAA GR I L I+P Y
Sbjct: 493 LFLFVLVHFIFSIISFTLPVPSGVFLPVFVLGAAIGRFYGEIIGLALEDIHIIHPGIYAI 552
Query: 298 XXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFLQ 444
T+S++V+I E TGQ+ LP+MI+++++ +LQ
Sbjct: 553 VGAAAFSASVTH-TVSVSVMIFEITGQLHFILPVMISVMLSNAVCAYLQ 600
>AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 978
Score = 55.2 bits (127), Expect = 3e-08
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +1
Query: 121 ILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLPS-KTINPAKYXX 297
+ +FV+ +F+ S +F L V SG+F+P + GAA GR I L I+P Y
Sbjct: 421 LFLFVLVHFIFSIISFTLPVPSGVFLPVFVLGAAIGRFYGEIIGLALEDIHIIHPGIYAI 480
Query: 298 XXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFLQ 444
T+S++V+I E TGQ+ LP+MI+++++ +LQ
Sbjct: 481 VGAAAFSASVTH-TVSVSVMIFEITGQLHFILPVMISVMLSNAVCAYLQ 528
>U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform b protein.
Length = 811
Score = 54.8 bits (126), Expect = 3e-08
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Frame = +1
Query: 106 YKPWSILV-FVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLPSKTIN- 279
Y P+ L F V YF L+ L V SG+F+P + GAA+GRL+ + + P I+
Sbjct: 476 YSPFVTLSSFQVVYFFLAILASTLPVPSGIFMPVFVLGAAFGRLVGEGVFSLDPYGHISG 535
Query: 280 -------PAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRF 438
P Y T+S+ VI+ E TGQ+ + LP+MI +++A +
Sbjct: 536 DIQFFVRPGVYAVVGAAAFCGAVTH-TVSVAVIVFELTGQLCHLLPVMIAVLIANAVASY 594
Query: 439 LQ 444
LQ
Sbjct: 595 LQ 596
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 54.8 bits (126), Expect = 3e-08
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Frame = +1
Query: 106 YKPWSILV-FVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLPSKTIN- 279
Y P+ L F V YF L+ L V SG+F+P + GAA+GRL+ + + P I+
Sbjct: 405 YSPFVTLSSFQVVYFFLAILASTLPVPSGIFMPVFVLGAAFGRLVGEGVFSLDPYGHISG 464
Query: 280 -------PAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRF 438
P Y T+S+ VI+ E TGQ+ + LP+MI +++A +
Sbjct: 465 DIQFFVRPGVYAVVGAAAFCGAVTH-TVSVAVIVFELTGQLCHLLPVMIAVLIANAVASY 523
Query: 439 LQ 444
LQ
Sbjct: 524 LQ 525
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 54.8 bits (126), Expect = 3e-08
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Frame = +1
Query: 106 YKPWSILV-FVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLPSKTIN- 279
Y P+ L F V YF L+ L V SG+F+P + GAA+GRL+ + + P I+
Sbjct: 405 YSPFVTLSSFQVVYFFLAILASTLPVPSGIFMPVFVLGAAFGRLVGEGVFSLDPYGHISG 464
Query: 280 -------PAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRF 438
P Y T+S+ VI+ E TGQ+ + LP+MI +++A +
Sbjct: 465 DIQFFVRPGVYAVVGAAAFCGAVTH-TVSVAVIVFELTGQLCHLLPVMIAVLIANAVASY 523
Query: 439 LQ 444
LQ
Sbjct: 524 LQ 525
>AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 811
Score = 54.8 bits (126), Expect = 3e-08
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Frame = +1
Query: 106 YKPWSILV-FVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLPSKTIN- 279
Y P+ L F V YF L+ L V SG+F+P + GAA+GRL+ + + P I+
Sbjct: 476 YSPFVTLSSFQVVYFFLAILASTLPVPSGIFMPVFVLGAAFGRLVGEGVFSLDPYGHISG 535
Query: 280 -------PAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRF 438
P Y T+S+ VI+ E TGQ+ + LP+MI +++A +
Sbjct: 536 DIQFFVRPGVYAVVGAAAFCGAVTH-TVSVAVIVFELTGQLCHLLPVMIAVLIANAVASY 594
Query: 439 LQ 444
LQ
Sbjct: 595 LQ 596
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 53.6 bits (123), Expect = 8e-08
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Frame = +1
Query: 118 SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAI-----SIQYMLP------ 264
S++++ + YF+L + V +G+F+P+ + GAA GRL+ + ++ + P
Sbjct: 432 SLVLYYILYFVLVAICISINVPAGVFVPSFIIGAAGGRLITVFPVGETMVVLFPEGMRGP 491
Query: 265 -SKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFL 441
I+P Y T+S++VII E TGQ+S LP++I +++ +FL
Sbjct: 492 GGPPIHPGLYAVVGAAAYTGAVTH-TLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFL 550
Query: 442 Q 444
Q
Sbjct: 551 Q 551
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 53.6 bits (123), Expect = 8e-08
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Frame = +1
Query: 118 SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAI-----SIQYMLP------ 264
S++++ + YF+L + V +G+F+P+ + GAA GRL+ + ++ + P
Sbjct: 432 SLVLYYILYFVLVAICISINVPAGVFVPSFIIGAAGGRLITVFPVGETMVVLFPEGMRGP 491
Query: 265 -SKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFL 441
I+P Y T+S++VII E TGQ+S LP++I +++ +FL
Sbjct: 492 GGPPIHPGLYAVVGAAAYTGAVTH-TLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFL 550
Query: 442 Q 444
Q
Sbjct: 551 Q 551
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 53.6 bits (123), Expect = 8e-08
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Frame = +1
Query: 118 SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAI-----SIQYMLP------ 264
S++++ + YF+L + V +G+F+P+ + GAA GRL+ + ++ + P
Sbjct: 432 SLVLYYILYFVLVAICISINVPAGVFVPSFIIGAAGGRLITVFPVGETMVVLFPEGMRGP 491
Query: 265 -SKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMDRRFL 441
I+P Y T+S++VII E TGQ+S LP++I +++ +FL
Sbjct: 492 GGPPIHPGLYAVVGAAAYTGAVTH-TLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFL 550
Query: 442 Q 444
Q
Sbjct: 551 Q 551
>Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical
protein T27D12.2b protein.
Length = 902
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Frame = +1
Query: 94 PMGSYKPW-SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLP-- 264
P G P S+L++ + YF++ L + SG+F+P + GA GR+ I + P
Sbjct: 466 PEGDMMPINSLLIYFLFYFIIVPICITLYIPSGIFVPCFVIGACGGRIFGEIISMIWPYG 525
Query: 265 -----SKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMD 429
I P Y ++S+ +I+ ETTGQ+ LP++I L+++
Sbjct: 526 LRGLGQPQIYPGLYAVVGAASFTGSVTH-SLSIALIVCETTGQLCALLPVLIALMISNAI 584
Query: 430 RRFLQ 444
FLQ
Sbjct: 585 CAFLQ 589
>Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical
protein T27D12.2a protein.
Length = 906
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Frame = +1
Query: 94 PMGSYKPW-SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLP-- 264
P G P S+L++ + YF++ L + SG+F+P + GA GR+ I + P
Sbjct: 466 PEGDMMPINSLLIYFLFYFIIVPICITLYIPSGIFVPCFVIGACGGRIFGEIISMIWPYG 525
Query: 265 -----SKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMD 429
I P Y ++S+ +I+ ETTGQ+ LP++I L+++
Sbjct: 526 LRGLGQPQIYPGLYAVVGAASFTGSVTH-SLSIALIVCETTGQLCALLPVLIALMISNAI 584
Query: 430 RRFLQ 444
FLQ
Sbjct: 585 CAFLQ 589
>D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein.
Length = 902
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Frame = +1
Query: 94 PMGSYKPW-SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLP-- 264
P G P S+L++ + YF++ L + SG+F+P + GA GR+ I + P
Sbjct: 466 PEGDMMPINSLLIYFLFYFIIVPICITLYIPSGIFVPCFVIGACGGRIFGEIISMIWPYG 525
Query: 265 -----SKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMD 429
I P Y ++S+ +I+ ETTGQ+ LP++I L+++
Sbjct: 526 LRGLGQPQIYPGLYAVVGAASFTGSVTH-SLSIALIVCETTGQLCALLPVLIALMISNAI 584
Query: 430 RRFLQ 444
FLQ
Sbjct: 585 CAFLQ 589
>AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 868
Score = 50.4 bits (115), Expect = 7e-07
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Frame = +1
Query: 94 PMGSYKPW-SILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYMLP-- 264
P G P S+L++ + YF++ L + SG+F+P + GA GR+ I + P
Sbjct: 428 PEGDMMPINSLLIYFLFYFIIVPICITLYIPSGIFVPCFVIGACGGRIFGEIISMIWPYG 487
Query: 265 -----SKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQMD 429
I P Y ++S+ +++ ETTGQ+ LP++I L+++
Sbjct: 488 LRGLGQPQIYPGLYAVVGAASFTGSVTH-SLSIALMLCETTGQLCALLPVLIALMISNAI 546
Query: 430 RRFLQ 444
FLQ
Sbjct: 547 CAFLQ 551
>Z68334-2|CAA92728.2| 797|Caenorhabditis elegans Hypothetical
protein C07H4.2 protein.
Length = 797
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Frame = +1
Query: 121 ILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYM-------------- 258
+L ++ F+++ +TFG+ V GLF+P++ GA GR+L I++ +
Sbjct: 473 LLWALIFKFVITIFTFGIKVPCGLFVPSIGMGAIAGRILGITVDQIFRAVQATPGHSDYF 532
Query: 259 ---LPSKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQ 423
+ + P Y RMT+SL VI+ E TG + +P M+ + ++
Sbjct: 533 TCQIGKDCVMPGLYAMVGAAAVLGGVTRMTVSLVVIMFELTGSLEFIVPTMVATMFSK 590
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 422 KWIGDFFNE-GIYDIYIQLAGVPLL 493
KWIGD ++ GIY+ +I+L G P L
Sbjct: 590 KWIGDGISKMGIYEAHIELNGYPFL 614
>Z54216-10|CAA90949.2| 797|Caenorhabditis elegans Hypothetical
protein C07H4.2 protein.
Length = 797
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Frame = +1
Query: 121 ILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYM-------------- 258
+L ++ F+++ +TFG+ V GLF+P++ GA GR+L I++ +
Sbjct: 473 LLWALIFKFVITIFTFGIKVPCGLFVPSIGMGAIAGRILGITVDQIFRAVQATPGHSDYF 532
Query: 259 ---LPSKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQ 423
+ + P Y RMT+SL VI+ E TG + +P M+ + ++
Sbjct: 533 TCQIGKDCVMPGLYAMVGAAAVLGGVTRMTVSLVVIMFELTGSLEFIVPTMVATMFSK 590
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 422 KWIGDFFNE-GIYDIYIQLAGVPLL 493
KWIGD ++ GIY+ +I+L G P L
Sbjct: 590 KWIGDGISKMGIYEAHIELNGYPFL 614
>AF173174-1|AAF13167.1| 796|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 796
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Frame = +1
Query: 121 ILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYM-------------- 258
+L ++ F+++ +TFG+ V GLF+P++ GA GR+L I++ +
Sbjct: 473 LLWALIFKFVITIFTFGIKVPCGLFVPSIGMGAIAGRILGITVDQIFRAVQATPGHSDYF 532
Query: 259 ---LPSKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQ 423
+ + P Y RMT+SL VI+ E TG + +P M+ + ++
Sbjct: 533 TCQIGKDCVMPGLYAMVGAAAVLGGVTRMTVSLVVIMFELTGSLEFIVPTMVATMFSK 590
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 422 KWIGDFFNE-GIYDIYIQLAGVPLL 493
KWIGD ++ GIY+ +I+L G P L
Sbjct: 590 KWIGDGISKMGIYEAHIELNGYPFL 614
>AB035090-1|BAA86959.1| 797|Caenorhabditis elegans clc chloride
channel homologue protein.
Length = 797
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Frame = +1
Query: 121 ILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGRLLAISIQYM-------------- 258
+L ++ F+++ +TFG+ V GLF+P++ GA GR+L I++ +
Sbjct: 473 LLWALIFKFVITIFTFGIKVPCGLFVPSIGMGAIAGRILGITVDQIFRAVQATPGHSDYF 532
Query: 259 ---LPSKTINPAKYXXXXXXXXXXXXXRMTISLTVIIIETTGQISNALPIMITLVVAQ 423
+ + P Y RMT+SL VI+ E TG + +P M+ + ++
Sbjct: 533 TCQIGKDCVMPGLYAMVGAAAVLGGVTRMTVSLVVIMFELTGSLEFIVPTMVATMFSK 590
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 422 KWIGDFFNE-GIYDIYIQLAGVPLL 493
KWIGD ++ GIY+ +I+L G P L
Sbjct: 590 KWIGDGISKMGIYEAHIELNGYPFL 614
>Z81576-4|CAB04642.1| 309|Caenorhabditis elegans Hypothetical
protein R10E8.5 protein.
Length = 309
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +1
Query: 52 FQTPEASVRSFLHDPMGSYKPWSILVFVVCYFLLSTWTFGLAVSSGLFIPNLLTGAAWGR 231
FQ+ ++ G + L + C F + G A S LF+ ++TG AWG
Sbjct: 66 FQSVSYVLQRLRRSLFGHDATFFFLSYGFCRFFKQNYIRG-AKQSLLFVAPVVTGVAWGL 124
Query: 232 LLAISIQYMLPSKT 273
L +++ PSK+
Sbjct: 125 LSWLTLN-ETPSKS 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,872,708
Number of Sequences: 27780
Number of extensions: 254290
Number of successful extensions: 726
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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