Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31917
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   2.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   3.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   3.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 178 KVTLTQLLIYTDVLNKYLKKR*RQTW 255
           K+TLTQ+  +     + LKK  + TW
Sbjct: 125 KMTLTQVSTWFANARRRLKKENKMTW 150


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 379 VPDRNKRKGSII 344
           VPD +KRKGS I
Sbjct: 362 VPDPSKRKGSYI 373


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -3

Query: 274 MLKERLATSDVISSLNIYLKRQYKSATVLRLPFRS 170
           M  +R+  +D++ +  +  K       VL+  +RS
Sbjct: 391 MFSDRIFINDIVKTAKLMAKSMKSPTYVLKFEYRS 425


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 355 LFFCSYPALFNSASDNAIFNKKCSLF 432
           L+FC      NSA +  ++N   S F
Sbjct: 333 LYFCRIMVYLNSAINPILYNLMSSKF 358


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 178  FRSFRDVRVCICIRSVTNVIMTADIFDTCH 89
            F S + V + +   S   +I  AD+F  CH
Sbjct: 985  FSSEKIVWLHLVYISFLGIICAADVFYICH 1014


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,440
Number of Sequences: 336
Number of extensions: 1941
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)