Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31917
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   1.1  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   2.5  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    23   2.5  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   7.5  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   7.5  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +1

Query: 385 NSASDNAIF---NKKCSLFNAXXXXXXXXCDLYSVS*LMRNNI 504
           +S  D++I    NK+  +F          C++Y+ S  M NN+
Sbjct: 346 SSVRDSSIICGGNKRSQVFRGRDANRQNSCNIYNASSRMENNL 388


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 328 RTF*KILLNLFFCSYPALFNSA 393
           RTF ++LL+L    YP L + A
Sbjct: 125 RTFLRVLLHLAMHDYPPLVSGA 146


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 328 RTF*KILLNLFFCSYPALFNSA 393
           RTF ++LL+L    YP L + A
Sbjct: 93  RTFLRVLLHLAMHDYPPLVSGA 114


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 274 MLKERLATSDVISSLNIYLK 215
           ++K+ +A   VIS  NIY++
Sbjct: 96  VIKKLVAECSVISDANIYIR 115


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 274 MLKERLATSDVISSLNIYLK 215
           ++K+ +A   VIS  NIY++
Sbjct: 96  VIKKLVAECSVISDANIYIR 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,113
Number of Sequences: 438
Number of extensions: 2262
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)