Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31912
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 275 1e-74
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 274 2e-74
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 274 2e-74
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 273 5e-74
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 272 9e-74
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 272 9e-74
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 268 1e-72
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 268 1e-72
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 268 1e-72
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 249 1e-66
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 199 8e-52
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 170 5e-43
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 141 2e-34
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 111 3e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 107 3e-24
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 101 4e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 73 2e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 69 2e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 3e-12
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.065
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.9
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.3
At3g05750.1 68416.m00646 expressed protein 28 4.3
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 4.3
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 27 5.7
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 7.5
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 7.5
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 7.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.5
At2g44130.1 68415.m05489 kelch repeat-containing F-box family pr... 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 275 bits (674), Expect = 1e-74
Identities = 126/137 (91%), Positives = 131/137 (95%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDA RAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 464 MFETFNTPAMYVAIQAV 514
MFETFNTPAMYVAIQAV
Sbjct: 125 MFETFNTPAMYVAIQAV 141
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 274 bits (673), Expect = 2e-74
Identities = 126/137 (91%), Positives = 130/137 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDA RAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 464 MFETFNTPAMYVAIQAV 514
MFETFNTPAMYVAIQAV
Sbjct: 125 MFETFNTPAMYVAIQAV 141
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 274 bits (673), Expect = 2e-74
Identities = 126/137 (91%), Positives = 130/137 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDA RAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 464 MFETFNTPAMYVAIQAV 514
MFETFNTPAMYVAIQAV
Sbjct: 125 MFETFNTPAMYVAIQAV 141
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 273 bits (669), Expect = 5e-74
Identities = 125/137 (91%), Positives = 130/137 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDA RAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 464 MFETFNTPAMYVAIQAV 514
MFETFN PAMYVAIQAV
Sbjct: 125 MFETFNVPAMYVAIQAV 141
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 272 bits (667), Expect = 9e-74
Identities = 124/137 (90%), Positives = 129/137 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDA RAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 464 MFETFNTPAMYVAIQAV 514
MFETFN PAMYVAIQAV
Sbjct: 125 MFETFNAPAMYVAIQAV 141
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 272 bits (667), Expect = 9e-74
Identities = 124/137 (90%), Positives = 129/137 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
E++ LV DNG+GM KAGFAGDDA RAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 464 MFETFNTPAMYVAIQAV 514
MFETFN PAMYVAIQAV
Sbjct: 125 MFETFNAPAMYVAIQAV 141
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 268 bits (657), Expect = 1e-72
Identities = 119/137 (86%), Positives = 130/137 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
+++ +V DNG+GM KAGFAGDDA RAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 464 MFETFNTPAMYVAIQAV 514
MFETFN+PAMYVAIQAV
Sbjct: 125 MFETFNSPAMYVAIQAV 141
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 268 bits (657), Expect = 1e-72
Identities = 119/137 (86%), Positives = 130/137 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
+++ +V DNG+GM KAGFAGDDA RAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 464 MFETFNTPAMYVAIQAV 514
MFETFN+PAMYVAIQAV
Sbjct: 125 MFETFNSPAMYVAIQAV 141
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 268 bits (657), Expect = 1e-72
Identities = 119/137 (86%), Positives = 130/137 (94%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
+++ +V DNG+GM KAGFAGDDA RAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 464 MFETFNTPAMYVAIQAV 514
MFETFN+PAMYVAIQAV
Sbjct: 125 MFETFNSPAMYVAIQAV 141
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 249 bits (609), Expect = 1e-66
Identities = 108/137 (78%), Positives = 126/137 (91%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 283
+E A+V DNG+GM KAGFAGDDA RAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 284 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 463
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 464 MFETFNTPAMYVAIQAV 514
MFE+F P+MY+ IQAV
Sbjct: 126 MFESFAFPSMYIGIQAV 142
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 199 bits (486), Expect = 8e-52
Identities = 91/132 (68%), Positives = 107/132 (81%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
+V D G GM +AGFAGD+A + VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 299 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 478
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 479 NTPAMYVAIQAV 514
+ PAMYV++Q+V
Sbjct: 119 DVPAMYVSMQSV 130
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 170 bits (413), Expect = 5e-43
Identities = 72/95 (75%), Positives = 87/95 (91%)
Frame = +2
Query: 227 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 406
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 407 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 511
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQA 95
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 141 bits (342), Expect = 2e-34
Identities = 63/134 (47%), Positives = 88/134 (65%), Gaps = 2/134 (1%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDASRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 292
+V DNG+G K GFAG++ +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 293 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 472
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 473 TFNTPAMYVAIQAV 514
+N +++ IQAV
Sbjct: 127 KYNFAGVFIQIQAV 140
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 111 bits (267), Expect = 3e-25
Identities = 62/155 (40%), Positives = 90/155 (58%), Gaps = 22/155 (14%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 253
+EV+A+VVD GS CKAG+AG+DA +AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 254 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 397
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 398 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 502
HP+LL E PLN + REK ++MFE + PA+++A
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMA 159
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 107 bits (258), Expect = 3e-24
Identities = 63/154 (40%), Positives = 87/154 (56%), Gaps = 21/154 (13%)
Frame = +2
Query: 116 ALVVDNGSGMCKAGFAGDDASRAVFPSIVG-----------------RPRHQ-GVMVGMG 241
A+V+DNG+G K GFAG+ + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 242 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 412
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 413 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 514
TE+PL P +RE +I+FETFN P +Y+A+ +V
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSV 158
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 101 bits (241), Expect = 4e-22
Identities = 54/132 (40%), Positives = 78/132 (59%), Gaps = 16/132 (12%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVG---------------M 238
+EV+A+VVD GS CKAG+AG+DA +AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 239 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 415
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 416 EAPLNPKANREK 451
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
+V+DNG+ + G+AG+ R VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 299 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 461 IMFETFNTPAMYVAIQA 511
++FET+ PA+ + A
Sbjct: 138 LLFETYGVPAVAFGVDA 154
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 68.9 bits (161), Expect = 2e-12
Identities = 38/128 (29%), Positives = 65/128 (50%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
+V+DNG G+ KAG G+ V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 299 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 478
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 479 NTPAMYVA 502
++Y+A
Sbjct: 122 GFSSLYIA 129
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 3e-12
Identities = 52/135 (38%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Frame = +2
Query: 116 ALVVDNGSGMCKAGFAGDDASRA-VFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 292
ALVVD GS KAG A D S A + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 293 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 469
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 470 ETFNTPAMYVAIQAV 514
ETFN Y + QAV
Sbjct: 113 ETFNVSGFYASEQAV 127
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.065
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 240 PIPTITP*WRGLPTIEGNTAREASSPAKPALHIPEPLSTTNAATSS 103
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 263 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 442
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 443 REK 451
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 263 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 442
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 443 REK 451
REK
Sbjct: 225 REK 227
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 351 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 262
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 280
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 281 RG--ILTLKYPIEHGIVTNWDDMEK 349
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 343 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 236
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 418 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRA 516
GSP+ +G + E+D D + NI+H + +H + A
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEA 126
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 402 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 244
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 412 H*GSPQPQGQQREDDPDHVRN 474
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDASRAVFPSIVGRPRHQGVM 229
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 329 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 478
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At2g44130.1 68415.m05489 kelch repeat-containing F-box family
protein very low similarity to SP|Q9ER30 Kelch-related
protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 409
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +2
Query: 170 DASRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 349
D +V P GR QG VGMG + + +G I +W ++
Sbjct: 226 DEWSSVTPMTEGRDECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPATDSWSRIDN 285
Query: 350 IW 355
+W
Sbjct: 286 VW 287
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,742,363
Number of Sequences: 28952
Number of extensions: 295730
Number of successful extensions: 866
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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