Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31911
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75690.1 68414.m08793 chaperone protein dnaJ-related contains... 34 0.065
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 32 0.20
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 31 0.35
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 30 1.1
At4g14910.1 68417.m02291 imidazoleglycerol-phosphate dehydratase... 28 4.3
At5g66840.1 68418.m08427 SAP domain-containing protein contains ... 27 7.5
At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) / ... 27 7.5
At1g57770.1 68414.m06554 amine oxidase family contains similarit... 27 9.9
>At1g75690.1 68414.m08793 chaperone protein dnaJ-related contains
Pfam PF00684 : DnaJ central domain (4 repeats); similar
to bundle sheath defective protein 2 (GI:4732091) [Zea
mays]
Length = 154
Score = 33.9 bits (74), Expect = 0.065
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 402 PSLHGPSLHCPSLHRP-SLHRPNLRSPSIHRPSI 500
P LH P +HCP P S NLRSPS P I
Sbjct: 9 PRLHSPFIHCPINFTPSSFSARNLRSPSTSYPRI 42
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 363 VHCHGLHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGL 515
V+ +H+P+L P P+L P+ P ++P L +P ++ P +Y P L
Sbjct: 60 VYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKPTLPAP-VYTPPVYKPTL 109
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 387 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCP 509
P ++ P +H P+L P +P+L P P ++P++ P
Sbjct: 58 PPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKPTLPAP 98
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 378 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCP 509
L P +P+L P+++ P+L P ++P+L SP +++P++ P
Sbjct: 128 LSPPVYTKPTL-SPTVYKPTLSPPVNNKPSL-SPPVYKPTLSPP 169
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 31.5 bits (68), Expect = 0.35
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 378 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCP 509
L P + P + PS+ P + PS+ P++ +PS+ PS+ P
Sbjct: 39 LPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSP 82
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 384 RPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGL 515
RP L P + P + PS+ P + P++ SPS+ PS+ P +
Sbjct: 37 RP-LPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSV 79
Score = 30.7 bits (66), Expect = 0.61
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 387 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPS 497
P + PS+ P + PS+ PS+ P++ SPS+ P+
Sbjct: 47 PKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSPN 83
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 387 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCPGL 515
PS L P + P + PS+ P + +PS+ PS+ P +
Sbjct: 32 PSPKPRPLPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSV 74
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 387 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPS 497
P + P PS+ PS+ PS+ P++ +PS+ P+
Sbjct: 42 PKVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPN 78
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 402 PSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYCP 509
P + P PS+ PS+ P++ +PS+ PS+ P
Sbjct: 42 PKVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSP 77
>At4g14910.1 68417.m02291 imidazoleglycerol-phosphate dehydratase,
putative similar to SP|P34047
Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19)
(IGPD 1) {Arabidopsis thaliana}; contains Pfam profile
PF00475: imidazoleglycerol-phosphate dehydratase
Length = 272
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 378 LHRPSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRPSIYC 506
L RP+L +L P S H P + S S HRPSI C
Sbjct: 11 LLRPNLSSRALLPPRTSIASSHPPPPRFLVMNSQSQHRPSISC 53
>At5g66840.1 68418.m08427 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 551
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +3
Query: 381 HRPSLHRPSLHGPSLHCPSLHRP-SLHRPNLRSPSIH 488
H P H P + P H P + P + H P P H
Sbjct: 343 HAPRSHAPPTYAPRPHAPRSYAPINSHLPRPNIPPYH 379
>At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) /
caspase family protein contains similarity to
latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
contains Pfam profile PF00656: ICE-like protease
(caspase) p20 domain
Length = 418
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 387 PSLHRPSLHGPSLHCPSLHRPSLHRPNLRSPSIHRP 494
P H P P H P P H P SP H P
Sbjct: 70 PYTHAPHAPSPFNHAPPDSYPFTHAPPASSPFNHAP 105
>At1g57770.1 68414.m06554 amine oxidase family contains similarity
to carotenoid isomerase [Lycopersicon esculentum]
GI:19550437, phytoene dehydrogenase (PDH1) GI:433144
from (Cercospora nicotianae); contains Pfam profile
PF01593 amine oxidase, flavin-containing
Length = 574
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 447 PSLHRPNLRSPSIHRPSIYCPG 512
PS+ PNL P H YCPG
Sbjct: 423 PSVLSPNLAPPGKHVLHAYCPG 444
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,773,362
Number of Sequences: 28952
Number of extensions: 58661
Number of successful extensions: 276
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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