Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31910
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    23   2.5  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    23   2.5  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    23   2.5  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    23   2.5  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    23   2.5  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   4.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.7  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    21   10.0 
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   10.0 
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   10.0 

>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 240 PAAWPVFRPKNPCRFGPTL 184
           P ++P F P N  RF P+L
Sbjct: 381 PTSFPRFIPPNAYRFRPSL 399


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 240 PAAWPVFRPKNPCRFGPTL 184
           P ++P F P N  RF P+L
Sbjct: 381 PTSFPRFIPPNAYRFRPSL 399


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 240 PAAWPVFRPKNPCRFGPTL 184
           P ++P F P N  RF P+L
Sbjct: 381 PTSFPRFIPPNAYRFRPSL 399


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 240 PAAWPVFRPKNPCRFGPTL 184
           P ++P F P N  RF P+L
Sbjct: 381 PTSFPRFIPPNAYRFRPSL 399


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 240 PAAWPVFRPKNPCRFGPTL 184
           P ++P F P N  RF P+L
Sbjct: 370 PTSFPRFIPPNAYRFRPSL 388


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 179 KHKVGPNLHGFFGRKTGQAAGFSYSDANKA 268
           KH +  +L   FG K  +    SYS  NK+
Sbjct: 1   KHHLEYHLRNHFGSKPFKCEKCSYSCVNKS 30


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 122 HFQRXPAGTPILNFYN*CNSQI 57
           H  R P GTPI      CN  I
Sbjct: 461 HKIRVPPGTPIYECNKRCNCDI 482


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 222 FRPKNPCRFGPT 187
           FRP    RFGPT
Sbjct: 167 FRPPQNPRFGPT 178


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 222 FRPKNPCRFGPT 187
           FRP    RFGPT
Sbjct: 167 FRPPQNPRFGPT 178


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 222 FRPKNPCRFGPT 187
           FRP    RFGPT
Sbjct: 405 FRPPQNPRFGPT 416


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,837
Number of Sequences: 438
Number of extensions: 3480
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)