BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31909
(516 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 318 9e-89
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 318 9e-89
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 318 9e-89
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 302 4e-84
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 24 2.6
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 23 4.6
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 23 6.1
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 318 bits (780), Expect = 9e-89
Identities = 147/155 (94%), Positives = 153/155 (98%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LDFEQEMATAA+S+SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME+CGIHET YN
Sbjct: 222 LDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 281
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVW
Sbjct: 282 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 318 bits (780), Expect = 9e-89
Identities = 147/155 (94%), Positives = 153/155 (98%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LDFEQEMATAA+S+SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME+CGIHET YN
Sbjct: 222 LDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 281
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVW
Sbjct: 282 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 318 bits (780), Expect = 9e-89
Identities = 147/155 (94%), Positives = 153/155 (98%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LDFEQEMATAA+S+SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME+CGIHET YN
Sbjct: 222 LDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYN 281
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVW
Sbjct: 282 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVW 341
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 302 bits (742), Expect = 4e-84
Identities = 142/155 (91%), Positives = 147/155 (94%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LDFEQEM AAAS+S EKSYELPDGQVITIGNERFR PEALFQPSFLGMES GIHETVYN
Sbjct: 222 LDFEQEMQAAAASSSSEKSYELPDGQVITIGNERFRAPEALFQPSFLGMESTGIHETVYN 281
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIM+CDVDIRKDLYAN+V+SGGTTMYPGIADRMQKEIT+LAPSTIKIKIIAPPERKYSVW
Sbjct: 282 SIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVW 341
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQ MWISK EYDE GPGIVHRKCF
Sbjct: 342 IGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 24.2 bits (50), Expect = 2.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 193 LHDGVVHGLVDAARFHTQEGRLEESLGTT 107
LH VH ++ T+ GRL + + TT
Sbjct: 467 LHPTTVHVTAVLVKYETKTGRLNKGVATT 495
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.4 bits (48), Expect = 4.6
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 196 RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREE 348
R R P +Q + + +VP RQ + RPR Q Q + + E
Sbjct: 246 RHRQP-QQQQQQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGE 295
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.0 bits (47), Expect = 6.1
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +1
Query: 166 RDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP 261
R+ + LHH+ ++ + H H +H+ P
Sbjct: 139 RNGIVLHHQAHQQQQQQQQQLHHHHHHHHNAP 170
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,797
Number of Sequences: 2352
Number of extensions: 9884
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -