Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31909
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 287 4e-78
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 285 2e-77
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 285 2e-77
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 284 2e-77
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 284 2e-77
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 283 4e-77
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 277 2e-75
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 276 6e-75
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 259 7e-70
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 251 2e-67
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 241 3e-64
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 215 1e-56
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 140 5e-34
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 127 5e-30
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 123 6e-29
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 102 2e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 75 3e-14
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 73 2e-13
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 70 1e-12
At5g43500.2 68418.m05318 expressed protein 46 2e-05
At5g43500.1 68418.m05319 expressed protein 46 2e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.049
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 1.4
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.5
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 4.3
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 5.7
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 5.7
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 5.7
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 5.7
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 7.5
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 7.5
At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel... 27 7.5
At2g06010.1 68415.m00657 expressed protein 27 7.5
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 27 9.9
At4g10290.1 68417.m01692 hypothetical protein 27 9.9
At3g50690.1 68416.m05546 leucine-rich repeat family protein 27 9.9
At3g04160.1 68416.m00440 expressed protein ; expression supporte... 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 287 bits (703), Expect = 4e-78
Identities = 130/155 (83%), Positives = 142/155 (91%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LD+EQEM TA S+S+EKSYELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YN
Sbjct: 223 LDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYN 282
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVW
Sbjct: 283 SIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 285 bits (698), Expect = 2e-77
Identities = 128/155 (82%), Positives = 143/155 (92%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YN
Sbjct: 223 VDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYN 282
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVW
Sbjct: 283 SIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 285 bits (698), Expect = 2e-77
Identities = 128/155 (82%), Positives = 143/155 (92%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YN
Sbjct: 223 VDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYN 282
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVW
Sbjct: 283 SIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 284 bits (697), Expect = 2e-77
Identities = 127/155 (81%), Positives = 143/155 (92%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YN
Sbjct: 223 LDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYN 282
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVW
Sbjct: 283 SIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 284 bits (697), Expect = 2e-77
Identities = 127/155 (81%), Positives = 143/155 (92%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YN
Sbjct: 223 LDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYN 282
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVW
Sbjct: 283 SIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 283 bits (695), Expect = 4e-77
Identities = 128/155 (82%), Positives = 143/155 (92%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LD+EQE+ TA +S+S+EK+YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YN
Sbjct: 223 LDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYN 282
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVW
Sbjct: 283 SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 277 bits (680), Expect = 2e-75
Identities = 126/155 (81%), Positives = 140/155 (90%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LDFEQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YN
Sbjct: 223 LDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYN 282
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVW
Sbjct: 283 SIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 276 bits (677), Expect = 6e-75
Identities = 125/155 (80%), Positives = 140/155 (90%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LD+EQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YN
Sbjct: 223 LDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYN 282
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVW
Sbjct: 283 SIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 343 IGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 259 bits (635), Expect = 7e-70
Identities = 115/155 (74%), Positives = 134/155 (86%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
+D+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQ S +GME+ GIHET YN
Sbjct: 224 VDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYN 283
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW
Sbjct: 284 SIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVW 343
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
+GGSILASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 344 VGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 251 bits (615), Expect = 2e-67
Identities = 112/155 (72%), Positives = 133/155 (85%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LD+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHE YN
Sbjct: 175 LDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYN 234
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCD DIRKDLY N V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVW
Sbjct: 235 SIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVW 294
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
IGGSILASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 295 IGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 241 bits (589), Expect = 3e-64
Identities = 110/139 (79%), Positives = 126/139 (90%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YN
Sbjct: 223 VDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYN 282
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVW
Sbjct: 283 SIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVW 342
Query: 362 IGGSILASLSTFQQMWISK 418
IGGSILASLSTFQQ+ I +
Sbjct: 343 IGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 215 bits (526), Expect = 1e-56
Identities = 96/154 (62%), Positives = 118/154 (76%)
Frame = +2
Query: 2 LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYN 181
LD+EQEM +++K+Y LPDGQ ITI ERF CPE LFQPS +G ES GIHE N
Sbjct: 212 LDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRN 271
Query: 182 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 361
SI+KC VD R+D+Y N +M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SVW
Sbjct: 272 SILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVW 331
Query: 362 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 463
IGGSILASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 332 IGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 140 bits (339), Expect = 5e-34
Identities = 68/151 (45%), Positives = 100/151 (66%), Gaps = 15/151 (9%)
Frame = +2
Query: 56 SYELPDGQVITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCD 199
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ V SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 200 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGG 370
VDIR++LY++ +++GGT+ + +R++K++ +P + ++K++A ER++SVWIGG
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGG 409
Query: 371 SILASLSTFQQMWISKEEYDESGPGIVHRKC 463
SILASL +FQQMW SK EY+E G + RKC
Sbjct: 410 SILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 127 bits (306), Expect = 5e-30
Identities = 68/158 (43%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
Frame = +2
Query: 11 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 190
E E+A + + LPDGQVI+IG ER+ EALFQPS LG+E GI E + I
Sbjct: 207 EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIIS 266
Query: 191 KCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE------RKY 352
+ + L NTV+ GGTT G R QKE L S I+ ++ PPE Y
Sbjct: 267 TVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMY 325
Query: 353 SVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 466
S W+GG+ILA + Q ++K +YDE+GP +VHRKCF
Sbjct: 326 SAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 123 bits (297), Expect = 6e-29
Identities = 62/157 (39%), Positives = 98/157 (62%), Gaps = 12/157 (7%)
Frame = +2
Query: 5 DFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNS 184
D+++E +T L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + V+
Sbjct: 223 DYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRC 282
Query: 185 IMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKII 331
I + D+D R LY + V+SGG+TMYPG+ R++KEI T L + ++++I
Sbjct: 283 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIE 342
Query: 332 APPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 439
PP RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 343 DPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 102 bits (244), Expect = 2e-22
Identities = 47/128 (36%), Positives = 74/128 (57%)
Frame = +2
Query: 83 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 262
I + NERF PE LFQP+ LGM G+ E + +I C ++ LY + +++GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 263 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 442
+ +R++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGS 412
Query: 443 GIVHRKCF 466
R+ F
Sbjct: 413 ARCRRRFF 420
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 74.9 bits (176), Expect = 3e-14
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = +2
Query: 83 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTT 253
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +M+GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 254 MYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 433
+ PG+ +R++ I + P I ++ + W G S A+ F +K +YDE
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDE 708
Query: 434 SG 439
G
Sbjct: 709 KG 710
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 72.5 bits (170), Expect = 2e-13
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Frame = +2
Query: 29 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD-VD 205
A S + S E+ T+ ERF+ E LFQP GM + +H+ V + CD
Sbjct: 325 AELSKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAG 384
Query: 206 IRKD--LYANTVMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGS 373
+ D + V++GG+ PG+++R+++E+ PS+I I++I PP + W G
Sbjct: 385 LTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAK 444
Query: 374 ILASLSTFQQMW-ISKEEY 427
++++LS F W I+++++
Sbjct: 445 LISNLSIFPGPWCITRKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 69.7 bits (163), Expect = 1e-12
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Frame = +2
Query: 89 IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 265
+G ERF PE F P + + + + I +D R+ LY N V+SGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 266 IADRMQKEITALAPS----------------TIKIKIIAPPERKYSVWIGGSILASLSTF 397
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
Query: 398 QQMWISKEEYDESGPGI 448
+KEEY+E G I
Sbjct: 400 FASCRTKEEYEEYGASI 416
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +2
Query: 149 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 325
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 326 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 439
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +2
Query: 149 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 325
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 326 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 439
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.049
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 161 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 340
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 341 ERKYS 355
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +2
Query: 161 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 340
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 341 ERKYS 355
ERK++
Sbjct: 394 ERKHA 398
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 29 AAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 178
A S + S E+ T+ ERF+ E LFQP G+ +H+ VY
Sbjct: 325 AELSKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGII---VHKLVY 371
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 276 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 121
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 157 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 330
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 157 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 330
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 198 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 64
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 277 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 390
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 233 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 331
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 233 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 331
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel,
putative (CNGC11) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 588
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 276 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 121
L+ + G+++ D+ +A YR L M Y++ W + + WKR
Sbjct: 496 LTEVEGFVISADDLKFVATQYRRLHSKQLQHMFRFYSLQWQTWAACFIQAAWKR 549
>At2g06010.1 68415.m00657 expressed protein
Length = 188
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 151 FHTQEGRLEESLGTTEPLVTDGDHL 77
F+ GRLE SL E +VT D+L
Sbjct: 164 FNMSSGRLEASLDRVEAIVTHSDYL 188
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 287 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 433
EI+ L P + +KI+A K V I S+L+ F MW+ K +YD+
Sbjct: 3 EISGL-PDDLLVKILAFLPTK--VAISTSVLSKQWRFLWMWLPKLKYDD 48
>At4g10290.1 68417.m01692 hypothetical protein
Length = 120
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 213 LRMSTSHFMMELYTVSWMPHDSIPRKEGWK 124
+R ++ + EL SW +S+PRK WK
Sbjct: 23 MRQTSDAKLAELGVTSWQLWESMPRKFPWK 52
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 271 RQDAEGDHRPRALDHQDQDHRSPREE 348
+ DAEG+ RP + D D++ EE
Sbjct: 153 KTDAEGNERPESDDEDDEEDEEDEEE 178
>At3g04160.1 68416.m00440 expressed protein ; expression supported
by MPSS
Length = 712
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +1
Query: 166 RDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPRE 345
RDR + H RR ++H + R R+ + D++ + D D+ + PR
Sbjct: 639 RDRRKDKHNDRRDDEFTRTKRHSIEGESYQNYRSSREKSSSDYKTKRDDPYDRRSQQPRN 698
Query: 346 EVLRMDRWI 372
+ L DR+I
Sbjct: 699 QNLFEDRYI 707
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,356,693
Number of Sequences: 28952
Number of extensions: 215422
Number of successful extensions: 751
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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