Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31906
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069581-1|AAL39726.1|  642|Drosophila melanogaster LD32037p pro...    30   1.6  
AF154417-1|AAD38396.1|  644|Drosophila melanogaster hypoxia-indu...    30   1.6  
AF020426-1|AAB88882.1|  644|Drosophila melanogaster basic helix-...    30   1.6  
AE014297-861|AAF54329.1|  642|Drosophila melanogaster CG11987-PA...    30   1.6  
AB002556-1|BAA22868.1|  642|Drosophila melanogaster bHLH-PAS tra...    30   1.6  
AY094843-1|AAM11196.1|  547|Drosophila melanogaster RE01910p pro...    29   3.7  
AY061833-1|AAL27644.1|  998|Drosophila melanogaster SD07678p pro...    29   3.7  
AL133505-3|CAB65842.1|  649|Drosophila melanogaster EG:BACH59J11...    29   3.7  
AE014298-401|AAF45782.2|  547|Drosophila melanogaster CG32796-PA...    29   3.7  
AE014298-400|AAF45784.2|  998|Drosophila melanogaster CG32796-PB...    29   3.7  
AE014297-1751|ABC66176.1|  149|Drosophila melanogaster CG34044-P...    29   3.7  
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    28   8.6  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    28   8.6  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    28   8.6  

>AY069581-1|AAL39726.1|  642|Drosophila melanogaster LD32037p
           protein.
          Length = 642

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 22  PNHEXHQPHRHLLHPG--AAAGQPVAPLLGDVLRCFSSTHSSPYDL 153
           P H    PH    HPG  A AGQP      D+L+    T ++  DL
Sbjct: 587 PPHPTAHPHHPHAHPGGPAGAGQPQGQEFSDMLQMLDHTPTTFEDL 632


>AF154417-1|AAD38396.1|  644|Drosophila melanogaster
           hypoxia-inducible factor 1b protein.
          Length = 644

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 22  PNHEXHQPHRHLLHPG--AAAGQPVAPLLGDVLRCFSSTHSSPYDL 153
           P H    PH    HPG  A AGQP      D+L+    T ++  DL
Sbjct: 589 PPHPTAHPHHPHAHPGGPAGAGQPQGQEFSDMLQMLDHTPTTFEDL 634


>AF020426-1|AAB88882.1|  644|Drosophila melanogaster basic
           helix-loop-helix PAS protein protein.
          Length = 644

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 22  PNHEXHQPHRHLLHPG--AAAGQPVAPLLGDVLRCFSSTHSSPYDL 153
           P H    PH    HPG  A AGQP      D+L+    T ++  DL
Sbjct: 589 PPHPTAHPHHPHAHPGGPAGAGQPQGQEFSDMLQMLDHTPTTFEDL 634


>AE014297-861|AAF54329.1|  642|Drosophila melanogaster CG11987-PA
           protein.
          Length = 642

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 22  PNHEXHQPHRHLLHPG--AAAGQPVAPLLGDVLRCFSSTHSSPYDL 153
           P H    PH    HPG  A AGQP      D+L+    T ++  DL
Sbjct: 587 PPHPTAHPHHPHAHPGGPAGAGQPQGQEFSDMLQMLDHTPTTFEDL 632


>AB002556-1|BAA22868.1|  642|Drosophila melanogaster bHLH-PAS
           transcription factor protein.
          Length = 642

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 22  PNHEXHQPHRHLLHPG--AAAGQPVAPLLGDVLRCFSSTHSSPYDL 153
           P H    PH    HPG  A AGQP      D+L+    T ++  DL
Sbjct: 587 PPHPTAHPHHPHAHPGGPAGAGQPQGQEFSDMLQMLDHTPTTFEDL 632


>AY094843-1|AAM11196.1|  547|Drosophila melanogaster RE01910p
           protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 10  NATMPNHEXHQPHRHLLHPGAAAGQPVAP 96
           N  +P H  H  H H  HPG   G P+ P
Sbjct: 482 NNNLPPHHQHL-HHHPGHPGGLVGIPIVP 509


>AY061833-1|AAL27644.1|  998|Drosophila melanogaster SD07678p protein.
          Length = 998

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 10   NATMPNHEXHQPHRHLLHPGAAAGQPVAP 96
            N  +P H  H  H H  HPG   G P+ P
Sbjct: 933  NNNLPPHHQHL-HHHPGHPGGLVGIPIVP 960


>AL133505-3|CAB65842.1|  649|Drosophila melanogaster EG:BACH59J11.2
           protein.
          Length = 649

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 10  NATMPNHEXHQPHRHLLHPGAAAGQPVAP 96
           N  +P H  H  H H  HPG   G P+ P
Sbjct: 584 NNNLPPHHQHL-HHHPGHPGGLVGIPIVP 611


>AE014298-401|AAF45782.2|  547|Drosophila melanogaster CG32796-PA,
           isoform A protein.
          Length = 547

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 10  NATMPNHEXHQPHRHLLHPGAAAGQPVAP 96
           N  +P H  H  H H  HPG   G P+ P
Sbjct: 482 NNNLPPHHQHL-HHHPGHPGGLVGIPIVP 509


>AE014298-400|AAF45784.2|  998|Drosophila melanogaster CG32796-PB,
            isoform B protein.
          Length = 998

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 10   NATMPNHEXHQPHRHLLHPGAAAGQPVAP 96
            N  +P H  H  H H  HPG   G P+ P
Sbjct: 933  NNNLPPHHQHL-HHHPGHPGGLVGIPIVP 960


>AE014297-1751|ABC66176.1|  149|Drosophila melanogaster CG34044-PA
           protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 450 SVQLECPARKLCHILFACCVHCCLLFFIADRLRTNI 343
           S Q  C A +L  +   CC  CC L+ I  +L+TN+
Sbjct: 115 SWQSLCHAFRLAFVCCCCC--CCWLYTICIKLKTNL 148


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +1

Query: 22  PNHEXHQPHRH-LLHPGAAAGQP 87
           P    H PH H L HP A AG P
Sbjct: 658 PQPAHHHPHHHPLQHPHAGAGDP 680


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +1

Query: 22  PNHEXHQPHRH-LLHPGAAAGQP 87
           P    H PH H L HP A AG P
Sbjct: 658 PQPAHHHPHHHPLQHPHAGAGDP 680


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +1

Query: 22   PNHEXHQPHRH-LLHPGAAAGQP 87
            P    H PH H L HP A AG P
Sbjct: 940  PQPAHHHPHHHPLQHPHAGAGDP 962


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,053,246
Number of Sequences: 53049
Number of extensions: 422115
Number of successful extensions: 1830
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)