Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31904
(424 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 130 3e-31
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 130 3e-31
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 130 5e-31
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 128 2e-30
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 128 2e-30
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 128 2e-30
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 128 2e-30
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 128 2e-30
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 112 1e-25
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 111 2e-25
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 102 9e-23
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 87 5e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 77 5e-15
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 60 8e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 48 2e-06
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 7e-05
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 42 2e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 32 0.14
At2g35020.1 68415.m04296 UTP--glucose-1-phosphate uridylyltransf... 27 5.2
At1g31070.2 68414.m03804 UDP-N-acetylglucosamine pyrophosphoryla... 27 5.2
At1g31070.1 68414.m03803 UDP-N-acetylglucosamine pyrophosphoryla... 27 5.2
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 27 6.9
At5g43500.2 68418.m05318 expressed protein 27 6.9
At5g43500.1 68418.m05319 expressed protein 27 6.9
At5g07240.1 68418.m00826 calmodulin-binding family protein conta... 26 9.1
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 26 9.1
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 130 bits (315), Expect = 3e-31
Identities = 58/65 (89%), Positives = 63/65 (96%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIV
Sbjct: 313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIV 372
Query: 242 HRKCF 228
HRKCF
Sbjct: 373 HRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 130 bits (315), Expect = 3e-31
Identities = 58/65 (89%), Positives = 63/65 (96%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIV
Sbjct: 313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIV 372
Query: 242 HRKCF 228
HRKCF
Sbjct: 373 HRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 130 bits (313), Expect = 5e-31
Identities = 58/65 (89%), Positives = 62/65 (95%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IV
Sbjct: 313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIV 372
Query: 242 HRKCF 228
HRKCF
Sbjct: 373 HRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 128 bits (309), Expect = 2e-30
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IV
Sbjct: 313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 372
Query: 242 HRKCF 228
HRKCF
Sbjct: 373 HRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 128 bits (309), Expect = 2e-30
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IV
Sbjct: 313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 372
Query: 242 HRKCF 228
HRKCF
Sbjct: 373 HRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 128 bits (309), Expect = 2e-30
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IV
Sbjct: 313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 372
Query: 242 HRKCF 228
HRKCF
Sbjct: 373 HRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 128 bits (309), Expect = 2e-30
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IV
Sbjct: 313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 372
Query: 242 HRKCF 228
HRKCF
Sbjct: 373 HRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 128 bits (309), Expect = 2e-30
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IV
Sbjct: 313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV 372
Query: 242 HRKCF 228
HRKCF
Sbjct: 373 HRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 112 bits (269), Expect = 1e-25
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
DRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F MWI+K EYDE G IV
Sbjct: 314 DRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIV 373
Query: 242 HRKCF 228
HRKCF
Sbjct: 374 HRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 111 bits (267), Expect = 2e-25
Identities = 48/65 (73%), Positives = 58/65 (89%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
+RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP IV
Sbjct: 265 ERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIV 324
Query: 242 HRKCF 228
H KCF
Sbjct: 325 HTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 102 bits (245), Expect = 9e-23
Identities = 43/64 (67%), Positives = 54/64 (84%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
+RM KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QMWI+K+EY+E G IV
Sbjct: 302 ERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIV 361
Query: 242 HRKC 231
HRKC
Sbjct: 362 HRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 87.0 bits (206), Expect = 5e-18
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 276
DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 77.0 bits (181), Expect = 5e-15
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAP---PERKYSVWIGGSILASLSTFQQMWISKEEYDESGP 252
+R+ K++ +P + ++K++A ER++SVWIGGSILASL +FQQMW SK EY+E G
Sbjct: 374 ERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGA 433
Query: 251 GIVHRKC 231
+ RKC
Sbjct: 434 SYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 59.7 bits (138), Expect = 8e-10
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = -3
Query: 419 RMXKEITALAPSTIKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKEEYDES 258
R KE L S I+ ++ PPE YS W+GG+ILA + Q ++K +YDE+
Sbjct: 295 RFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDET 353
Query: 257 GPGIVHRKCF 228
GP +VHRKCF
Sbjct: 354 GPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 48.4 bits (110), Expect = 2e-06
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3
Query: 422 DRMXKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIV 243
+R+ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G
Sbjct: 356 ERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARC 415
Query: 242 HRKCF 228
R+ F
Sbjct: 416 RRRFF 420
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 43.2 bits (97), Expect = 7e-05
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = -3
Query: 380 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 246
+++ +++ P ++++VW GGS+L+S F +KEEY+E G I
Sbjct: 372 VEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/43 (37%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -3
Query: 380 IKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 255
++++I PP RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 337 LRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 32.3 bits (70), Expect = 0.14
Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = -3
Query: 422 DRMXKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKEEY 267
+R+ +E+ PS+I I++I PP + W G ++++LS F W I+++++
Sbjct: 409 ERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At2g35020.1 68415.m04296 UTP--glucose-1-phosphate
uridylyltransferase family protein similar to SP|Q16222
UDP-N-acetylhexosamine pyrophosphorylase (Antigen X)
{Homo sapiens}; contains Pfam profile PF01704:
UTP--glucose-1-phosphate uridylyltransferase
Length = 502
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 291 LLEGGQGSQDGSTDPYG 341
LL GGQG++ GS+DP G
Sbjct: 129 LLSGGQGTRLGSSDPKG 145
>At1g31070.2 68414.m03804 UDP-N-acetylglucosamine
pyrophosphorylase-related low similarity to SP|P43123
UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
{Saccharomyces cerevisiae}
Length = 505
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 291 LLEGGQGSQDGSTDPYG 341
LL GGQG++ GS+DP G
Sbjct: 133 LLSGGQGTRLGSSDPKG 149
>At1g31070.1 68414.m03803 UDP-N-acetylglucosamine
pyrophosphorylase-related low similarity to SP|P43123
UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
{Saccharomyces cerevisiae}
Length = 153
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 291 LLEGGQGSQDGSTDPYG 341
LL GGQG++ GS+DP G
Sbjct: 133 LLSGGQGTRLGSSDPKG 149
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 26.6 bits (56), Expect = 6.9
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -3
Query: 407 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 261
EI+ L P + +KI+A K V I S+L+ F MW+ K +YD+
Sbjct: 3 EISGL-PDDLLVKILAFLPTK--VAISTSVLSKQWRFLWMWLPKLKYDD 48
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 353 ERKYSVWIGGSILASLSTFQQMWISKEEYDESG 255
E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 527 EPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 353 ERKYSVWIGGSILASLSTFQQMWISKEEYDESG 255
E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 539 EPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At5g07240.1 68418.m00826 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 401
Score = 26.2 bits (55), Expect = 9.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 390 ALDHQDQDHRSPREEVLRMDRW 325
A+DH +HRSP +D+W
Sbjct: 205 AMDHHHNNHRSPMGSSRLLDQW 226
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -2
Query: 423 RQDAXGDH--RPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 304
R +H +P+AL H S ++ LR W+ P FP+
Sbjct: 419 RHSVDNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,996,436
Number of Sequences: 28952
Number of extensions: 148399
Number of successful extensions: 399
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 655255392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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