Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31903
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces... 71 1e-13
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 33 0.025
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 30 0.24
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 27 1.3
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 27 1.3
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 27 1.3
SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subuni... 27 1.7
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 27 1.7
SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharom... 27 2.2
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 27 2.2
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 27 2.2
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.8
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 5.1
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 5.1
SPBC23E6.06c |||3,4-dihydroxy-2-butanone 4-phosphate synthase |S... 25 6.7
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 25 6.7
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 25 8.9
SPAC227.08c |yth1||zinc finger protein Yth1|Schizosaccharomyces ... 25 8.9
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 25 8.9
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 25 8.9
>SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1009
Score = 70.9 bits (166), Expect = 1e-13
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +2
Query: 191 TAAVSVNANRLKSSTAAEPFLNGSSSAYVETMYNAWLADPNSVHASWDAFFRNA-TNGAQ 367
T S+ NR ++ + FL G ++ YV+ MY+AW DPNSVHASW A+F+N G
Sbjct: 28 TCLSSLQQNRTFATQPTDDFLTGGAADYVDEMYDAWKKDPNSVHASWQAYFKNVQERGVS 87
Query: 368 PGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSISAG 478
P A+ PP L Y + L S + + I G
Sbjct: 88 PSKAFQAPP-LLDYADSYTALDSSLINGNNYADIDVG 123
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 33.1 bits (72), Expect = 0.025
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 5/130 (3%)
Frame = +2
Query: 128 FNISKSGQSERFASWLLNKPQTAAVSVNA--NRLKSSTAAEPFLNGSSSAYVETMYNAWL 301
FN+ K+ E + ++KP + + N N L+ + A S SA N +
Sbjct: 514 FNVFKNVGEEHQGAEQIDKPFSCPPTWNTGPNSLQQTIANSRPEGNSGSAKKAAAANPMI 573
Query: 302 AD---PNSVHASWDAFFRNATNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSIS 472
PNS S + T P Y P P PY +N TS+ PS G P+
Sbjct: 574 PSIVLPNSAMPSAMPMYPTPTMPYIP-VGY-PVPGYTPYMRNPSQHTSVAPSPNGTPTSG 631
Query: 473 AGSPINEKII 502
S + +I
Sbjct: 632 NSSTVGSPMI 641
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.9 bits (64), Expect = 0.24
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 365 QPGAAYTP--PPNLAPYNKNEVPLTSLVPSSGGMPSISAGSPI 487
QP +A+ P P LAP N+N +++ P+ G M S + +
Sbjct: 1733 QPASAHLPNLQPTLAPINQNAYVPSNIAPAMGAMQSAPSAEAV 1775
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 27.5 bits (58), Expect = 1.3
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +2
Query: 182 KPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETM-YNAWLADPNSVHASWDAFFRNATN 358
KP + + N N + + + NG++S+ V Y ++ S F T
Sbjct: 360 KPMASPMLPNVNSMPYLSNGDHNNNGNTSSPVSRFSYGQHTSNVPSTQKLPSNF--RVTQ 417
Query: 359 GAQPGAAYTPPPNLAPYNK 415
GA P Y PPP + P K
Sbjct: 418 GAPPSHTYGPPPPVQPKPK 436
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 27.5 bits (58), Expect = 1.3
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 356 NGAQPGAAYTPPPNLAPYNKNEVPLTSLV---PSSGGMPSIS 472
+GAQ G+ PP L P+N ++ +L PS +P +S
Sbjct: 493 DGAQSGSPQFPPFELPPHNYSQAQSPNLATPSPSFSSLPDVS 534
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 344 RNATNGAQPGAAYTPPPN---LAPYNKNEVPLTSLVPSSGGMPSISAGSPIN 490
R T+ + P +A +P PN P K E P +++ S+ +++A +P N
Sbjct: 74 RPKTSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQTVAAAAPSN 125
>SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subunit
Rpc53|Schizosaccharomyces pombe|chr 3|||Manual
Length = 330
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 359 GAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSG 454
G G+ Y PPPN+ K++ L+ L SSG
Sbjct: 67 GRPIGSVYVPPPNVKNEEKDDA-LSKLAASSG 97
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 154 TLARFRDVKHYPCSMHDCYLL*PPGVSDL*HCSNKTKV 41
TL R D + S C + PGVSD +CS T++
Sbjct: 41 TLVRICDECAFGSSQDRCIICGAPGVSDCYYCSECTRM 78
>SPCC1442.17c ||SPCC285.02c|DUF292 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 271
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +2
Query: 116 ARIVFNISKSGQSERFASWLLNKPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETMYNA 295
A + N+ S E+ S Q VN N S AEP NGS++A N
Sbjct: 183 ADTMLNLESSENREQPTSLKEENTQEDDEKVNGNLANISKRAEPQNNGSTNASSLQSSNY 242
Query: 296 WLADPNSVHAS 328
+P H++
Sbjct: 243 LPTNPTLTHSN 253
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 26.6 bits (56), Expect = 2.2
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 245 PFLNGSSSAYVETMYNAWLAD-PNSVHASWDAFFRNATNGAQPGAAYTPPPNLAPYNKNE 421
P N + SA + + ++D PN H DAF ++ + QP +A P L+ ++
Sbjct: 9 PVGNETKSAALNALPKIKISDSPNRHHNLVDAFMQSPSYSTQPKSA-VEPLGLS-FSPGY 66
Query: 422 VPLTSLVPSSGGMPSISAGSPI 487
+ +S P G + S S+ P+
Sbjct: 67 ISPSSQSPHHGPVRSPSSRKPL 88
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +2
Query: 260 SSSAYVETMYNAWLADPNSVHASWDAFFRNATNGAQPGAAYTPPPNLAPYNKNEVPLTSL 439
SS +VET Y A+PNS+ +D ++NG AY P ++ + S
Sbjct: 118 SSPFFVETQYAYQKANPNSIAFLYD--LSQSSNGTLYMRAYQLTPEFMAAHEEKTWTASS 175
Query: 440 VPSSGGMPS 466
+ S PS
Sbjct: 176 LNSHNLTPS 184
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/65 (21%), Positives = 35/65 (53%)
Frame = +2
Query: 134 ISKSGQSERFASWLLNKPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETMYNAWLADPN 313
+S S Q +S L +A ++ +++ +S+++ L+ SSS+ V + ++ ++ +
Sbjct: 84 VSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSS 143
Query: 314 SVHAS 328
H+S
Sbjct: 144 LSHSS 148
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 228 APPRRNPSSMAPVQLTSRPCTMHGSPTQTPYTR 326
+P + P+++APV+ TS T + TP R
Sbjct: 77 SPKKATPAAVAPVEATSAVDTSEAVASMTPNKR 109
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 389 PPNLAPYNKNEVPLTSLVPSSGGMPSISAGSPI 487
PP+ AP + P T+ V + G+P + G+ I
Sbjct: 71 PPSTAPGSAGSTPKTTPVSLNAGVPPSNTGANI 103
>SPBC23E6.06c |||3,4-dihydroxy-2-butanone 4-phosphate synthase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 204
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 240 AAVELFSLLAFTETAAVCGLFRSHDANLSLWPD 142
AAV+L L A+C L R D +S + D
Sbjct: 146 AAVDLCKLAGLPPVGAICELVREEDGLMSRFDD 178
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.0 bits (52), Expect = 6.7
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 347 NATNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSISAGSPINEKI 499
NATNG TP P P +V + PS+ +PS S+ NEK+
Sbjct: 370 NATNGTSQSNISTPLPEPTPGQPRKVSGHN-PPSARRLPSASS-VKFNEKL 418
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 24.6 bits (51), Expect = 8.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 98 ITIMHRARIVFNISKSGQSERFASWLLNKPQTAAVSVNANRLKSSTAAEPFL 253
+ I + V +KSG+S++ SWL + +AN L + EP +
Sbjct: 196 VYIYKKKYCVIKFNKSGRSKKKDSWLKRSKDELLRTDSANLLTLNDNDEPVM 247
>SPAC227.08c |yth1||zinc finger protein Yth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 170
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 382 VCGAWLSSVCRIAEKCIPRRVYGVWVGEPC 293
VC WL +C+ E+C Y + PC
Sbjct: 53 VCKHWLRGLCKKGEQCDFLHEYNLKKMPPC 82
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 24.6 bits (51), Expect = 8.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 248 FLNGSSSAYVETMYNA 295
FLNG+SS Y++ +Y +
Sbjct: 184 FLNGTSSPYIDAIYGS 199
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 24.6 bits (51), Expect = 8.9
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 SAYVETMYNAWLADP-NSVHASWDAFFRNATNGAQPGAAYTPPPNLAPYNKNEVPLTSLV 442
S Y+ + W P + +A+W + N Y P N+ P +PLT
Sbjct: 74 SKYIGATVSGWAPGPLDGSNAAWREYITLDVN-----LVYFVPKNITPSQAATLPLTFTT 128
Query: 443 PSSG 454
S G
Sbjct: 129 ASQG 132
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,167,034
Number of Sequences: 5004
Number of extensions: 43715
Number of successful extensions: 172
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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