Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31903
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       27   0.50 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   3.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   4.6  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   4.6  
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    23   4.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.1  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   6.1  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 344 RNATNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMP 463
           R+  NG  P    T PP++AP      P T+    +G  P
Sbjct: 396 RSLVNGGTPSTT-TMPPSVAPTTSTVAPGTTTTTPTGANP 434


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 167 SWLLNKPQTAAVSVNANRL 223
           +W+ ++ +T A+ VN NRL
Sbjct: 45  NWVTDESKTVAIVVNGNRL 63


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 311 NSVHASWDAFFRNATNGAQPGAAYTPPPNLAP 406
           N     + A F N  N AQP  A  PPP + P
Sbjct: 563 NPAQLRFPAGFPNLPN-AQPPPAPPPPPPMGP 593


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 184 TTDCRGFSKCQ*AEELHRGG 243
           T+  + F +C+ A+ELHR G
Sbjct: 498 TSPGKVFERCELAQELHRQG 517


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -3

Query: 448 RWHERCERDLI 416
           RW+E+C+R+L+
Sbjct: 188 RWYEQCKRELV 198


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +1

Query: 223 EELHRGGTLPQWLQFSLRRDHVQCMARRPKLRTRVLGCIFP 345
           +E H+     +  +   R  H    + RP  RTR+LG   P
Sbjct: 153 DECHKNYGRQELWEICARLTHQAPSSDRPAQRTRILGLAGP 193


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 365 QPGAAYTPPPNLAPYNKNEVPLTSLVPSSG 454
           +PG    P P+  P    E+P+  L P  G
Sbjct: 635 EPGLLGPPGPSGEPGRDAEIPMDQLKPIKG 664


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 177 RSHDANLSLWPDL 139
           RSHD  +  WPDL
Sbjct: 228 RSHDHPVMFWPDL 240


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,921
Number of Sequences: 2352
Number of extensions: 12553
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)