Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31899
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    63   4e-09
UniRef50_A5KC07 Cluster: Putative uncharacterized protein; n=1; ...    37   0.31 
UniRef50_Q1FHK7 Cluster: Binding-protein-dependent transport sys...    34   2.2  
UniRef50_Q8IPD1 Cluster: CG31720-PA; n=1; Drosophila melanogaste...    34   2.2  
UniRef50_Q4S6S9 Cluster: Chromosome 14 SCAF14723, whole genome s...    32   8.9  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 62.9 bits (146), Expect = 4e-09
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = +2

Query: 296 LADPADFVVPQSINKRPKLLYKINLKQTKESVRRG-THQRKNKIVIFI*FRAFSYL 460
           LADPADFVVPQSINKRPK LYKINLKQTK   + G T + K     ++  R F ++
Sbjct: 22  LADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77



 Score = 58.8 bits (136), Expect = 7e-08
 Identities = 27/32 (84%), Positives = 27/32 (84%)
 Frame = +1

Query: 367 LKTNKGIRPTGYTSKEKQNCYFYLIPGIFIFI 462
           LK  KGIR TG TSKEKQNCYFYLIP IFIFI
Sbjct: 46  LKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77


>UniRef50_A5KC07 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1253

 Score = 36.7 bits (81), Expect = 0.31
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -3

Query: 355  QKFRSFIYRLRHYEVCRVS*FYITILLYN*LIFITNKQLYYVI 227
            +K R F Y L+H+++C+V  F+  I   N L  I  + L+++I
Sbjct: 1089 KKLRKFCYTLKHFDICKVDHFWFNIYCQNELKKIFFRNLHFII 1131


>UniRef50_Q1FHK7 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=1; Clostridium
           phytofermentans ISDg|Rep: Binding-protein-dependent
           transport systems inner membrane component - Clostridium
           phytofermentans ISDg
          Length = 324

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +2

Query: 347 KLLYKINLKQTKESVRRGTHQRKNKIVIFI*FRAFSYLFTF*TLSGLHKSFK 502
           ++L K+  K  KES R    Q  N  + +I    FS LF++  ++GL  +FK
Sbjct: 3   RILKKVKQKTGKESFRAQMKQHGNLFIFYIPAVVFSILFSYIPMAGLIMAFK 54


>UniRef50_Q8IPD1 Cluster: CG31720-PA; n=1; Drosophila
           melanogaster|Rep: CG31720-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 579

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 410 FDVYPVGRIPLFVLSLFYTKV*VFYLSIEALRSLPGQLVL 291
           F +YP+G   L +   FY    + Y+SI  LR+LPG++++
Sbjct: 373 FKMYPIG---LLISCCFYALTLIVYISIAKLRNLPGKILI 409


>UniRef50_Q4S6S9 Cluster: Chromosome 14 SCAF14723, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 14
           SCAF14723, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 1128

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +2

Query: 290 VKLADPADFVVPQSINKRPKLLYKINLKQTKESVRRGTHQRKNKIVIF 433
           VKL D  +  +PQ   K  + + K    Q K+   +G H+R  KIV+F
Sbjct: 423 VKLPDYLEKYLPQEARKPGQDVQKQEQLQNKKRTAKGFHKRPGKIVLF 470


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,832,920
Number of Sequences: 1657284
Number of extensions: 9057187
Number of successful extensions: 17907
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17900
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)