Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31899
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.40 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   4.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   4.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   4.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 399 VHIKGKTKLLFLFNSGHFHIYLPFK-PSLDFTNH 497
           V I     LLFL  SG+F ++L F  P + FT H
Sbjct: 62  VSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVH 95


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 400 YTSKEKQNCYFYLIPGIFIFIYLLNPL 480
           Y S + Q   FY  P +  F Y  NPL
Sbjct: 80  YQSPQTQPARFYSTPIVPHFAYNHNPL 106


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 439 LNKNNNFVFPLMCT 398
           LNK+ N  FPL+ T
Sbjct: 114 LNKSKNLQFPLLST 127


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 439 LNKNNNFVFPLMCT 398
           LNK+ N  FPL+ T
Sbjct: 114 LNKSKNLQFPLLST 127


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 439 LNKNNNFVFPLMCT 398
           LNK+ N  FPL+ T
Sbjct: 114 LNKSKNLQFPLLST 127


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 385 FLCLF*VYFIQKFRSFIYRLRHY 317
           FLC   V + Q +  F Y+L  Y
Sbjct: 146 FLCRHTVEYFQNYIHFFYQLLLY 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,199
Number of Sequences: 336
Number of extensions: 2614
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)