Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31899
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1 p...    29   9.7  
AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SE...    29   9.7  
AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein.             29   9.7  

>BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1
           protein.
          Length = 1542

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 438 NSGHFHIYLPFK-PSLDFTNHSRPK 509
           +S H  I +P K PSLD TNH R K
Sbjct: 342 DSSHVRITIPIKAPSLDPTNHKRKK 366


>AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SEB)
           protein.
          Length = 1542

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 438 NSGHFHIYLPFK-PSLDFTNHSRPK 509
           +S H  I +P K PSLD TNH R K
Sbjct: 342 DSSHVRITIPIKAPSLDPTNHKRKK 366


>AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein.
          Length = 1605

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 438 NSGHFHIYLPFK-PSLDFTNHSRPK 509
           +S H  I +P K PSLD TNH R K
Sbjct: 405 DSSHVRITIPIKAPSLDPTNHKRKK 429


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,006,946
Number of Sequences: 237096
Number of extensions: 1348199
Number of successful extensions: 1921
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1921
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)