BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV31898 (516 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 34 0.052 AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 1.5 Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 2.0 Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 2.6 Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.6 U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 27 8.0 AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical ... 27 8.0 >AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical protein F52G3.5 protein. Length = 386 Score = 34.3 bits (75), Expect = 0.052 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +1 Query: 364 TTTCTRPRTRFSL-KKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 TTT P T KK ++R+ PKT + + +T T APT + E TT Sbjct: 195 TTTTEEPSTTSEYRKKSKKNRSKRPKTTKTTTTSTTTTEAPTTTTEEYTT 244 >AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical protein Y51B11A.1 protein. Length = 1079 Score = 29.5 bits (63), Expect = 1.5 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T AP+ S T T Sbjct: 118 PVQTTTTTAPET--TSTEPPSSSTSPVQTTTTTAPETTSTEAPSSSTTPVQT 167 Score = 28.7 bits (61), Expect = 2.6 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T +P+ S T T Sbjct: 210 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQT 259 Score = 28.7 bits (61), Expect = 2.6 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T +P+ S T T Sbjct: 486 PVQTTTITAPET--TSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQT 535 Score = 28.3 bits (60), Expect = 3.4 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS--PTEXTTL 513 P TTT T P T + +P S T +T + + ++T+T P+ S P + TT+ Sbjct: 256 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTI 308 Score = 28.3 bits (60), Expect = 3.4 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS--PTEXTTL 513 P TTT T P T + +P S T +T + + ++T+T P+ S P + TT+ Sbjct: 440 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTI 492 Score = 28.3 bits (60), Expect = 3.4 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAP--TVSPTEXTTL 513 P TTT T P T S + P+ S T +T + + ++T+T P + SP + TT+ Sbjct: 762 PVQTTTTTAPETT-STEPPSSSNT-PVQTTTTTAPETTSTEPPSSSTSPVQTTTI 814 Score = 28.3 bits (60), Expect = 3.4 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS--PTEXTTL 513 P TTT T P T + +P S T +T + + ++T+T P+ S P + TT+ Sbjct: 877 PVQTTTITAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTI 929 Score = 27.9 bits (59), Expect = 4.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 187 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 236 Score = 27.9 bits (59), Expect = 4.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 302 PVQTTTITAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 351 Score = 27.9 bits (59), Expect = 4.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 417 PVQTTTITAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 466 Score = 27.9 bits (59), Expect = 4.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 532 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 581 Score = 27.9 bits (59), Expect = 4.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 555 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 604 Score = 27.9 bits (59), Expect = 4.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 578 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 627 Score = 27.9 bits (59), Expect = 4.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 601 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 650 Score = 27.9 bits (59), Expect = 4.6 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 624 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 673 Score = 27.9 bits (59), Expect = 4.6 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS--PTEXTTL 513 P TTT T P T + +P S T +T + + ++T+T P+ S P + TT+ Sbjct: 693 PVQTTTTTAPET--TSTEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTI 745 Score = 27.9 bits (59), Expect = 4.6 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS--PTEXTTL 513 P TTT T P T + +P S T +T + + ++T+T P+ S P + TT+ Sbjct: 831 PVQTTTTTAPET--TSTEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTI 883 Score = 27.5 bits (58), Expect = 6.0 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 164 PVQTTTTTAPET--TSTEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQT 213 Score = 27.5 bits (58), Expect = 6.0 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 647 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSNTPVQT 696 Score = 27.5 bits (58), Expect = 6.0 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAP--TVSPTEXTT 510 P TTT T P T S + P+ S T +T + + ++T+T P + SP + TT Sbjct: 670 PVQTTTTTAPETT-STEPPSSSNT-PVQTTTTTAPETTSTEPPSSSTSPVQTTT 721 Score = 27.5 bits (58), Expect = 6.0 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T + +P S T +T + + ++T+T P+ S T T Sbjct: 739 PVQTTTITAPET--TSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSNTPVQT 788 Score = 27.5 bits (58), Expect = 6.0 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAP--TVSPTEXTT 510 P TTT T P T S + P+ S T +T + + ++T+T P + SP + TT Sbjct: 808 PVQTTTITAPETT-STEPPSSSNT-PVQTTTTTAPETTSTEPPSSSTSPVQTTT 859 Score = 27.1 bits (57), Expect = 8.0 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAP--TVSPTEXTT 510 P TTT T P T S + P+ S T +T + + ++T+T P + SP + TT Sbjct: 95 PVQTTTTTAPETT-STEAPS-SSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTT 146 Score = 27.1 bits (57), Expect = 8.0 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAP--TVSPTEXTT 510 P TTT T P T S + P+ S T +T + + ++T+T P + SP + TT Sbjct: 141 PVQTTTTTAPETT-STEAPS-SSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTT 192 Score = 27.1 bits (57), Expect = 8.0 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T S + P+ S T +T + + ++T+T P+ S T T Sbjct: 233 PVQTTTTTAPETT-STESPS-SSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 282 Score = 27.1 bits (57), Expect = 8.0 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS--PTEXTT 510 P TTT T P T + +P S T +T + + ++T T P+ S P + TT Sbjct: 325 PVQTTTTTAPET--TSTEPPSSSTTPVQTTTTTAPETTRTEPPSSSTTPVQNTT 376 Score = 27.1 bits (57), Expect = 8.0 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T S + P+ S T +T + + ++T+T P+ S T T Sbjct: 509 PVQTTTTTAPETT-STESPS-SSTTPVQTTTTTAPETTSTEPPSSSTTPVQT 558 >Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical protein C29E6.1a protein. Length = 812 Score = 29.1 bits (62), Expect = 2.0 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 358 KATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 + TTT +P T S KK + T P K S+ +T T +P V T T Sbjct: 375 QVTTTTKKPSTTTSTKKLTTTTTTTP--KPSQKPTTTTTKSPVVITTTTKT 423 >Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical protein C30H6.4 protein. Length = 476 Score = 28.7 bits (61), Expect = 2.6 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +1 Query: 355 PKATTTCTRPRTRFSLKKPARSRTLAPKTKA-SRSRDSTNTLAPTVSPTEXTT 510 P TTT T P T S + + ++ T S + +T+T PT + T TT Sbjct: 265 PTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTTTTTMQTT 317 >Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical protein C30H6.11 protein. Length = 460 Score = 28.7 bits (61), Expect = 2.6 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 364 TTTCTRPRTRFSLKKPARSRTLAPKTKA-SRSRDSTNTLAPTVSPTEXTT 510 TTT T T + + T P T + ++ +T T PT +PT TT Sbjct: 236 TTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTT 285 >U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical protein T09B4.5a protein. Length = 327 Score = 27.1 bits (57), Expect = 8.0 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = +1 Query: 391 RFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXT 507 R + K PAR+RT K SRS + T T S T T Sbjct: 39 RKASKSPARARTSNVKKTPSRSASKSATRGRTASKTPKT 77 >AF000265-7|AAB52941.1| 893|Caenorhabditis elegans Hypothetical protein C18E3.3 protein. Length = 893 Score = 27.1 bits (57), Expect = 8.0 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 400 LKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTT 510 +KK +S+ K + SRS D++ +PTV T+ ++ Sbjct: 247 IKKSKKSKHHKKKKRKSRSEDTSGNSSPTVIATDGSS 283 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.313 0.124 0.376 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,633,264 Number of Sequences: 27780 Number of extensions: 145539 Number of successful extensions: 510 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 444 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 506 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 996506972 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits)
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