Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31898
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g34970.1 68418.m04127 hypothetical protein similar to At5g368... 29 1.9
At2g29510.1 68415.m03584 expressed protein 27 5.7
At1g73990.1 68414.m08569 peptidase U7 family protein similar to ... 27 5.7
At5g36860.1 68418.m04416 Ulp1 protease family protein contains P... 27 7.5
At4g05280.1 68417.m00799 Ulp1 protease family protein contains P... 27 7.5
At4g03300.1 68417.m00451 Ulp1 protease family protein contains P... 27 7.5
At3g43390.1 68416.m04592 hypothetical protein similar to At3g243... 27 7.5
At3g24390.1 68416.m03063 Ulp1 protease family protein contains P... 27 7.5
At1g53600.1 68414.m06090 pentatricopeptide (PPR) repeat-containi... 27 7.5
At1g27780.1 68414.m03399 Ulp1 protease family protein similar to... 27 7.5
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 27 7.5
At5g51850.1 68418.m06428 expressed protein similar to unknown pr... 27 9.9
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 27 9.9
>At5g34970.1 68418.m04127 hypothetical protein similar to At5g36850,
At1g27780, At2g05560, At3g42730, At1g52020, At2g14770,
At3g43390, At3g24390, At1g34740, At1g25886, At4g03300,
At4g05280
Length = 478
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 382 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTTL 513
PR + +K R ++P+ K S ++ + +P+V+PTE T+
Sbjct: 11 PRKQHGQRKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 54
>At2g29510.1 68415.m03584 expressed protein
Length = 839
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 370 TCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 492
+C+ PR+R + P+RSRTL ++ + + S A +S
Sbjct: 362 SCSAPRSRKAESSPSRSRTLDRRSTETLPKQSDQKPAKVLS 402
>At1g73990.1 68414.m08569 peptidase U7 family protein similar to
protease IV GB:AAA57008 from [Escherichia coli];
contains Pfam profile PF01343: Peptidase family U7
Length = 677
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 327 IIRYDNDVAPEGYHYLYETENKILAEEAGKVXNVGTENEGIKVKGFYEYVG 479
+I +DVA G +Y+ N I+AE ++G + YE +G
Sbjct: 450 VIASMSDVAASGGYYMAMAANAIVAENLTLTGSIGVVTARFTLAKLYEKIG 500
>At5g36860.1 68418.m04416 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1204
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 382 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTTL 513
PR + K R ++P+ K S ++ + +P+V+PTE T+
Sbjct: 11 PRKQHGPGKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 54
>At4g05280.1 68417.m00799 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At1g25886, At4g03300
Length = 1312
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 382 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTTL 513
PR + K R ++P+ K S ++ + +P+V+PTE T+
Sbjct: 11 PRKQHGPGKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 54
>At4g03300.1 68417.m00451 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886
Length = 1285
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 382 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTTL 513
PR + K R ++P+ K S ++ + +P+V+PTE T+
Sbjct: 163 PRKQHGPGKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 206
>At3g43390.1 68416.m04592 hypothetical protein similar to At3g24380,
At5g36840, At5g35010, At3g42740, At4g05290, At2g14770,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886, At4g03300
Length = 1113
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 382 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTTL 513
PR + K R ++P+ K S ++ + +P+V+PTE T+
Sbjct: 11 PRKQHGPGKEKRVLRVSPRRKRSSTKATEELGSPSVAPTEDLTV 54
>At3g24390.1 68416.m03063 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At4g05280,
At1g25886, At4g03300
Length = 1139
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 382 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTTL 513
PR + K R ++P+ K S ++ + +P+V+PTE T+
Sbjct: 11 PRKQHGPGKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 54
>At1g53600.1 68414.m06090 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 839
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -2
Query: 287 HLAGNVCGCDHLAGNVCGCDWHGNGRLHDGQGNNAGSLVSITKVFAEVL 141
H G CG H G GC G G G G + G + S V A L
Sbjct: 781 HHGGGGCGGGHHGGGGGGCGGCGGGGC--GGGGDGGGMTSRAVVAASTL 827
>At1g27780.1 68414.m03399 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At5g36850, At3g42730, At1g52020,
At3g24390, At4g05280, At1g25886, At4g03300; contains
Pfam profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1468
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 382 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTTL 513
PR + K R ++P+ K S ++ + +P+V+PTE T+
Sbjct: 11 PRKQHGPGKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 54
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 382 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTTL 513
PR + K R ++P+ K S ++ + +P+V+PTE T+
Sbjct: 11 PRKQHGPGKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 54
>At5g51850.1 68418.m06428 expressed protein similar to unknown
protein (emb|CAB81354.1)
Length = 590
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 352 LPKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSP 495
L + TT PRTRFS K+ +S + P + +S SR P +P
Sbjct: 250 LRRDTTVSCSPRTRFSEKENKQSTSHKPNSSSS-SRPEPIIQKPKPTP 296
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 382 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTEXTTL 513
PR + K R ++P+ K S ++ + +P+V+PTE T+
Sbjct: 11 PRKQHGPGKEKRVLRVSPRRKRSATKVTEELGSPSVAPTEDLTV 54
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.124 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,282,506
Number of Sequences: 28952
Number of extensions: 138597
Number of successful extensions: 346
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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