Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31894
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0655 - 19621717-19622594,19623186-19623227,19624323-196244...    29   1.7  
05_07_0028 + 27153663-27153932,27154966-27155175,27156220-271564...    29   2.2  
09_06_0180 - 21385655-21386017,21386399-21386623,21386859-21387305     28   3.9  
01_03_0013 + 11645786-11645853,11646674-11646802,11646906-116469...    28   3.9  
05_07_0024 + 27125474-27125764                                         27   8.9  

>10_08_0655 -
           19621717-19622594,19623186-19623227,19624323-19624479,
           19625333-19625405,19625483-19625595
          Length = 420

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 49  SLMALAASKSLFEKSCPENAHTTLNPCVPTCADPELKHT 165
           S +AL+ SK + E + PE     L  C+     P  +HT
Sbjct: 260 STVALSVSKVMGEDAKPETVSEALTACIEETCSPAYRHT 298


>05_07_0028 +
           27153663-27153932,27154966-27155175,27156220-27156414,
           27156491-27156840,27157198-27157423,27157524-27157692,
           27158145-27158990,27159647-27159818,27159934-27160052,
           27160117-27160155,27161033-27161157,27161250-27161309,
           27161471-27161542,27161980-27162114
          Length = 995

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +1

Query: 19  KHYFIMFLLVSLMALAASKSLFEKSCPENAHTTLNPCVPTCADPELKHTSC 171
           K Y I  L+ S    A  KS   +S   N  T L  C P+  DPE +   C
Sbjct: 803 KAYLIQNLMTSRWIAAQQKSPQPQSEDRNGCTVLPGCCPSYRDPENQIFGC 853


>09_06_0180 - 21385655-21386017,21386399-21386623,21386859-21387305
          Length = 344

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 249 GNGHAFSLRVEEVSRITVAGCDESRHATGVFQFR-VCTGRHAG 124
           GNG AF  + + V R+TV           +  F  VC GRH+G
Sbjct: 123 GNGEAFGAQKDGVWRLTVKDLKIGNIEVFLVDFLIVCIGRHSG 165


>01_03_0013 +
           11645786-11645853,11646674-11646802,11646906-11646945,
           11647075-11647191
          Length = 117

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 281 LK*PPRHIQHSATGTHFPSELKRYPESQWQVAMKAV 174
           LK   R +       HF  E  RYP S+W++ + A+
Sbjct: 38  LKVEERSVVEQGAEGHFGGEASRYPFSRWRLGLAAL 73


>05_07_0024 + 27125474-27125764
          Length = 96

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +1

Query: 10  MAAKHYFIMFLLVSLMALAASKSLFEKSCPENAHTTLNPCVPTCADPELKHTSC---VTA 180
           MAAK   +  LLV ++A+AA+    E +      T L PC P          +C   + A
Sbjct: 1   MAAKASAVFVLLVVVLAVAAAMRGAEAA--TCTPTQLTPCAPAIVGNSPPTAACCGKLKA 58

Query: 181 FIATCHC 201
             A+C C
Sbjct: 59  HPASCFC 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,494,646
Number of Sequences: 37544
Number of extensions: 267860
Number of successful extensions: 580
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)