Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31892
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...   113   1e-27
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.51 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   0.90 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   0.90 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   0.90 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   4.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.4  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score =  113 bits (271), Expect = 1e-27
 Identities = 53/56 (94%), Positives = 54/56 (96%)
 Frame = +2

Query: 251 LQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPG 418
           LQDVYKIGGIGTVPVGRVETGVLKPG +VVFAPANITTEVKSVEMHHEAL EAVPG
Sbjct: 1   LQDVYKIGGIGTVPVGRVETGVLKPGMVVVFAPANITTEVKSVEMHHEALPEAVPG 56


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -2

Query: 319 QHTSFN-SADGHGTNTTDFVYVLQ 251
           ++ SFN +A+GHG NT+   Y  Q
Sbjct: 280 EYNSFNWTANGHGHNTSSHNYYAQ 303


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 406 FLESFVVHLHRFDFSSDVG 350
           FLE  + H  RF FSS VG
Sbjct: 68  FLEMTLAHHCRFKFSSSVG 86


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 202 IESFNEAFSVSFAFFTLH 149
           I++FN+ F  SF  FTL+
Sbjct: 271 IDAFNDIFGWSFLLFTLY 288


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 202 IESFNEAFSVSFAFFTLH 149
           I++FN+ F  SF  FTL+
Sbjct: 197 IDAFNDIFGWSFLLFTLY 214


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 364 SSDVGGGKDNNGTWFQHTSF 305
           ++ V GG +NNGT   H+ F
Sbjct: 182 AAQVSGGNNNNGTPGGHSGF 201


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 275  GIGTVPVGRVETGVLKPGTIVVFAPANITTEV 370
            G+G +P         KP   V  AP  +TT V
Sbjct: 990  GLGLIPDNPSREDCTKPPEPVTPAPPQVTTGV 1021



 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 7    KSXKEVSSYIKKIGYNPAAVAFVPISGWHGRQHVGAF 117
            KS ++ + YIK  G+  A    + +  +  R   G+F
Sbjct: 945  KSVRDKAEYIKTKGFGGAVAWTIDLDDFSNRCCGGSF 981


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 305 ETGVLKPGTIVVFAPANITTEVKS 376
           ETG ++PG I    P   T EV++
Sbjct: 96  ETGSIRPGVIGGSKPRVATPEVEN 119


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/30 (33%), Positives = 11/30 (36%)
 Frame = +3

Query: 204 PSCHLPAPLTSPCVFPCKTYTKSVVLVPCP 293
           PS   P P   P  F C  Y     + P P
Sbjct: 155 PSIIDPGPALPPAGFLCNNYLPLPQVPPLP 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,977
Number of Sequences: 336
Number of extensions: 3020
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)