BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31892
(506 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 194 3e-50
03_01_0547 + 4093196-4093657,4094267-4095148 194 3e-50
03_01_0544 + 4082528-4082989,4083585-4084466 194 3e-50
03_01_0543 + 4076981-4077442,4078145-4079026 194 3e-50
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 73 1e-13
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 72 3e-13
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 69 2e-12
02_04_0462 + 23131433-23132836 69 2e-12
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 68 5e-12
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 64 5e-11
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 64 5e-11
05_03_0559 - 15460348-15460357,15460966-15461290,15461340-15462306 31 0.40
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 29 2.1
12_02_0396 + 18577574-18578056,18578094-18578723 29 2.8
10_01_0204 + 2199778-2200835,2201212-2201311 29 2.8
03_01_0019 + 167900-168343,168567-168751,169076-169430 28 3.7
10_01_0291 + 3010685-3010838,3010954-3011489 28 5.0
10_01_0290 + 2999775-2999928,3000281-3000816 28 5.0
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 28 5.0
06_03_1165 - 28106604-28106915 28 5.0
02_01_0772 - 5755371-5756654,5757808-5757834 28 5.0
10_01_0274 - 2901033-2901778,2902475-2902634 27 6.5
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974... 27 6.5
09_06_0060 + 20593519-20594667,20594898-20594927,20595237-20595326 27 6.5
07_03_1080 + 23815232-23817040 27 6.5
06_01_0113 + 886899-886906,887029-887107,887390-887458,887547-88... 27 6.5
05_03_0313 + 12200743-12200955,12201238-12201622,12201997-122022... 27 6.5
04_04_1158 - 31342934-31343272,31343508-31343658,31343745-313439... 27 6.5
03_06_0136 + 31933843-31934715,31934906-31935021,31935233-319354... 27 6.5
10_01_0334 - 3680612-3681266,3682253-3682374 27 8.7
06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850 27 8.7
03_02_0919 - 12392471-12392636,12392740-12392931,12393366-123934... 27 8.7
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 27 8.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 194 bits (474), Expect = 3e-50
Identities = 94/135 (69%), Positives = 109/135 (80%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNM+E ST + W+KG L+EALD I P RP+DKPLRLPLQDVYKIGG
Sbjct: 199 DNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGG 246
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK
Sbjct: 247 IGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVK 306
Query: 458 ELRRGYVAGDSKNNP 502
+L+RGYVA +SK++P
Sbjct: 307 DLKRGYVASNSKDDP 321
Score = 47.2 bits (107), Expect = 8e-06
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 16 KEVSSYIKKIGYNPAAVAFVPISGWHG 96
KEVSSY+KK+GYNP + FVPISG+ G
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEG 198
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 194 bits (474), Expect = 3e-50
Identities = 94/135 (69%), Positives = 109/135 (80%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNM+E ST + W+KG L+EALD I P RP+DKPLRLPLQDVYKIGG
Sbjct: 199 DNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGG 246
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK
Sbjct: 247 IGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVK 306
Query: 458 ELRRGYVAGDSKNNP 502
+L+RGYVA +SK++P
Sbjct: 307 DLKRGYVASNSKDDP 321
Score = 47.2 bits (107), Expect = 8e-06
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 16 KEVSSYIKKIGYNPAAVAFVPISGWHG 96
KEVSSY+KK+GYNP + FVPISG+ G
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEG 198
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 194 bits (474), Expect = 3e-50
Identities = 94/135 (69%), Positives = 109/135 (80%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNM+E ST + W+KG L+EALD I P RP+DKPLRLPLQDVYKIGG
Sbjct: 199 DNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGG 246
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK
Sbjct: 247 IGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVK 306
Query: 458 ELRRGYVAGDSKNNP 502
+L+RGYVA +SK++P
Sbjct: 307 DLKRGYVASNSKDDP 321
Score = 47.2 bits (107), Expect = 8e-06
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 16 KEVSSYIKKIGYNPAAVAFVPISGWHG 96
KEVSSY+KK+GYNP + FVPISG+ G
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEG 198
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 194 bits (474), Expect = 3e-50
Identities = 94/135 (69%), Positives = 109/135 (80%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNM+E ST + W+KG L+EALD I P RP+DKPLRLPLQDVYKIGG
Sbjct: 199 DNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGG 246
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK
Sbjct: 247 IGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVK 306
Query: 458 ELRRGYVAGDSKNNP 502
+L+RGYVA +SK++P
Sbjct: 307 DLKRGYVASNSKDDP 321
Score = 47.2 bits (107), Expect = 8e-06
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 16 KEVSSYIKKIGYNPAAVAFVPISGWHG 96
KEVSSY+KK+GYNP + FVPISG+ G
Sbjct: 172 KEVSSYLKKVGYNPDKIPFVPISGFEG 198
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +2
Query: 173 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAP 349
DG CL++A+D + PP+R KPLRLP+ DV+ +G V + G+VE G + G+ ++ P
Sbjct: 442 DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMP 501
Query: 350 ANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 478
VK++E + + A GDNV ++ + + G V
Sbjct: 502 FGELAVVKTIERNSSSCNLARAGDNVAIGLQGIDPSHIMPGGV 544
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 71.7 bits (168), Expect = 3e-13
Identities = 35/107 (32%), Positives = 56/107 (52%)
Frame = +2
Query: 176 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN 355
G CL E LD I P R P+R+P+ D YK +GTV +G++E+G + G ++ P
Sbjct: 162 GPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNK 219
Query: 356 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 496
+V SV + ++ A PG+NV + + ++ G+V KN
Sbjct: 220 ANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIKN 266
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 69.3 bits (162), Expect = 2e-12
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Frame = +2
Query: 113 PSTKMPWFKGWQVERKEGKAD--GKC----LIEALDAILP-PARPTDKPLRLPLQDVYKI 271
P ++P +G + +G D GK L++A+D +P P R DK +P++DV+ I
Sbjct: 219 PGDEIPIIRGSALSALQGTNDEIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPIEDVFSI 278
Query: 272 GGIGTVPVGRVETGVLKPG---TIVVFAPAN-ITTEVKSVEMHHEALQEAVPGDNVGFNV 439
G GTV GRVE G +K G I+ P+ + T V VEM + L GDNVG +
Sbjct: 279 QGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGDNVGLLL 338
Query: 440 KNVSVKELRRGYV 478
+ + +++RG V
Sbjct: 339 RGLKRGDVQRGQV 351
>02_04_0462 + 23131433-23132836
Length = 467
Score = 69.3 bits (162), Expect = 2e-12
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Frame = +2
Query: 185 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANIT 361
LI+++D +P P R TD P L ++DV+ I G GTV GR+E G +K G V T
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRET 319
Query: 362 TE--VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 478
V VEM + + +A+ GDNVG ++ + ++ RG V
Sbjct: 320 RNCTVTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMV 360
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 67.7 bits (158), Expect = 5e-12
Identities = 34/110 (30%), Positives = 58/110 (52%)
Frame = +2
Query: 173 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 352
DG CL E LD I P R P+R+P+ D YK +GTV +G++E+G ++ G ++ P
Sbjct: 206 DGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPN 263
Query: 353 NITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP 502
+V + + ++ A P +NV + + +++ G+V S NP
Sbjct: 264 KTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVL-SSIGNP 312
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 64.5 bits (150), Expect = 5e-11
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Frame = +2
Query: 176 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPA 352
G CL++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPC 518
Query: 353 NITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 472
VKS+E + A GDNV +++ + +L G
Sbjct: 519 GEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKLILG 558
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 64.5 bits (150), Expect = 5e-11
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Frame = +2
Query: 176 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPA 352
G CL++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V+ +P
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPC 518
Query: 353 NITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 472
VKS+E + A GDNV +++ + +L G
Sbjct: 519 GEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKLILG 558
>05_03_0559 - 15460348-15460357,15460966-15461290,15461340-15462306
Length = 433
Score = 31.5 bits (68), Expect = 0.40
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 279 IPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSL-RSTCHPLNQGILV----E 115
+PP+ + RG RRG V AGGR RA R P A R HPL++ LV
Sbjct: 83 LPPM--SLARGGRRGAEVRGAGGR---RAPPRARPPARGGAPRRPHHPLHRLYLVLELAR 137
Query: 114 GSNMLSXVPSRNGHESD 64
G ++LS + R G D
Sbjct: 138 GGSVLSALDGRGGGHYD 154
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 293 VGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 430
+G + + P TIV +P T KSVE +E L A G ++G
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIG 297
>12_02_0396 + 18577574-18578056,18578094-18578723
Length = 370
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 152 PPAIP*TKAFWLKAPTCCLPCHPEMGTKAT 63
PP+ P K W + P P PE G K+T
Sbjct: 340 PPSAPKPKKVWKEKPKTPAPSPPEFGRKST 369
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 309 VSTLPTGTVP-IPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHP 139
+S +P +V + + S R RRR ++ RAG R+ SRA +R PS S+ HP
Sbjct: 202 ISFVPCPSVSSVRSAIVFSARRRRRQSAIARAGARV-SRAGVR--PSPASSILVGVHP 256
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = -3
Query: 315 TPVSTLPTGTVPIPP----ILYTSCRGR-RRGLSVGRAGGRMASRASMRHFPSA 169
+P S++ G P P L T CRGR R + RAG R+ SRA +R P++
Sbjct: 287 SPASSILVGVHPHRPPSSLSLSTLCRGRGGRESATARAGARV-SRAGVRPSPAS 339
>03_01_0019 + 167900-168343,168567-168751,169076-169430
Length = 327
Score = 28.3 bits (60), Expect = 3.7
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 351 AGAKTTMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPS 172
+ + + P PV+ PT T P PPI + G G S G GG + +RA+ P+
Sbjct: 48 SSSSNSSTPSIPPPVA--PTPTAPTPPI-PSPGTGSSNGSSGGGGGGWLNARATWYGAPN 104
>10_01_0291 + 3010685-3010838,3010954-3011489
Length = 229
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 255 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGIL 121
C G+ V + G + A H+PSAL + + C P+ + I+
Sbjct: 105 CPGQEPSKIVPMSEGTFIAVAGQTHYPSALCASATICGPIKKKII 149
>10_01_0290 + 2999775-2999928,3000281-3000816
Length = 229
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 255 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGIL 121
C G+ V + G + A H+PSAL + + C P+ + I+
Sbjct: 105 CPGQEPSKIVPMSEGTFVAIAGKTHYPSALCASATICGPIKKKII 149
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 177 ENASLKLSMPSCHLPAPLTSPCVFPCKTYTKS 272
E A++ +S P LP P P +FP + T+S
Sbjct: 21 EEAAVVVSQPQKTLPVPTAGPSLFPQQEVTQS 52
>06_03_1165 - 28106604-28106915
Length = 103
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 367 SQICGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 483
SQ G A SSP + R R +R E + A L CW
Sbjct: 62 SQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
>02_01_0772 - 5755371-5756654,5757808-5757834
Length = 436
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 276 PPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPL 136
PP+ ++C R G A R+ RA A PSLR++ HPL
Sbjct: 8 PPVDSSACLCRVERSVAGAAAARLMPRAKA----CAQPSLRASIHPL 50
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -1
Query: 155 APPAIP*TKAFWLKAPTCCLPCHPEMGTKATA 60
AP P T A+ AP C P PE GT ATA
Sbjct: 233 APEYPPSTPAYGTPAPECP-PSTPEYGTPATA 263
>09_06_0061 + 20596360-20596618,20597039-20597158,20597329-20597462,
20597578-20597730,20597816-20597927,20598022-20598352,
20598524-20598737,20598842-20598931,20599669-20599924,
20600029-20600141,20600733-20600831,20600915-20600980,
20601018-20601167,20601278-20601368,20601710-20601749,
20603888-20605247,20605478-20605507,20605834-20605885,
20606264-20606397,20606513-20606665,20607089-20607202
Length = 1356
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 207 MASRASMRHFPSALPSLR--STCHPLNQGILVEGSNMLSXVPSRNGH 73
++S AS +FP AL LR ST PL + +++ N+L +R+GH
Sbjct: 939 LSSTAS--YFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAATRSGH 983
>09_06_0060 + 20593519-20594667,20594898-20594927,20595237-20595326
Length = 422
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 207 MASRASMRHFPSALPSLR--STCHPLNQGILVEGSNMLSXVPSRNGH 73
++S AS +FP AL LR ST PL + +++ N+L +R+GH
Sbjct: 126 LSSTAS--YFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAAARSGH 170
>07_03_1080 + 23815232-23817040
Length = 602
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 312 PVSTLPTGTVPIPPILYTS-CRGRRRGL 232
P S+ PTGT P PP+ +S G GL
Sbjct: 123 PASSTPTGTAPTPPLSTSSTAAGAGHGL 150
>06_01_0113 +
886899-886906,887029-887107,887390-887458,887547-887636,
887725-887863,888466-888568,888664-888716,888801-888867,
889147-889255,889499-889567,889676-889745,889833-889952,
890052-890201,890611-890873
Length = 462
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 397 SPRSCTWRQCRFQRKERVRQGIASWLCCW*LQKQPT 504
+P TW + Q +R WLC W Q++PT
Sbjct: 217 TPNQRTWAE-GLQLAASIRFQFPQWLCSWDPQRRPT 251
>05_03_0313 +
12200743-12200955,12201238-12201622,12201997-12202274,
12202359-12202976
Length = 497
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 152 PPAIP*TKAFWLKAPTCCLPCHPEMGTKA 66
PP+ P K W K P P PE G K+
Sbjct: 467 PPSAPKPKKVWRKKPKTPTPSPPETGGKS 495
>04_04_1158 -
31342934-31343272,31343508-31343658,31343745-31343976,
31344173-31344284,31344572-31344690,31344772-31344936,
31345049-31345247,31345351-31345733,31345838-31345902,
31346003-31346047,31346402-31346467,31346707-31346778,
31346907-31346981,31347086-31347157,31347255-31347326,
31347954-31348022,31348109-31348180,31348280-31348351,
31348756-31348827,31349295-31349366,31349528-31349711,
31350082-31350220
Length = 948
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 125 FWLKAPTCCLPCHPEMGTKATAAGL*PIFL 36
FW TCC+P G +A L P F+
Sbjct: 550 FWAGKGTCCIPAQGYYGPSISALSLKPNFI 579
>03_06_0136 +
31933843-31934715,31934906-31935021,31935233-31935408,
31935846-31936036,31936119-31936205,31936304-31936461,
31936555-31936765,31936856-31937005
Length = 653
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Frame = -3
Query: 318 NTPVSTLP-TGTVPIPPILYTSCRGRRRGLSVGRA-----GGRMASRASMRHF-PSALPS 160
N P S P G P P +LY S G + L+ G + G A A F P LPS
Sbjct: 41 NNPPSPPPGQGPAPTPTLLYASATGTSKALAAGLSRRLAEAGVTAHPADAAAFDPDDLPS 100
Query: 159 L 157
L
Sbjct: 101 L 101
>10_01_0334 - 3680612-3681266,3682253-3682374
Length = 258
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -3
Query: 246 RRRGLSVGRAGGRMASRASMRHFPSA--LPS 160
RRRG S GGR +S +S R FPSA LPS
Sbjct: 190 RRRGQSRRARGGRKSS-SSRRSFPSAAVLPS 219
>06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850
Length = 1173
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 131 WFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYK 268
W +GW+V K + DG E L + P D RL +++ Y+
Sbjct: 148 WKQGWEVSYKSDEWDG----EKLKVFVAPHSHNDPGWRLTVEEYYE 189
>03_02_0919 -
12392471-12392636,12392740-12392931,12393366-12393463,
12393719-12394219,12394287-12394532,12395627-12396029,
12396155-12396348,12396755-12396925,12397064-12397366,
12397463-12397520,12397678-12397757,12398910-12398987,
12399530-12399613,12399692-12399757,12399908-12399980,
12400080-12400249,12400368-12400427,12400632-12400679,
12401217-12401255,12401364-12401372
Length = 1012
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +3
Query: 63 CRFRAHFWMARX----TTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMP 206
C R H+W R T Q K LGS + RW V K++ + + S P
Sbjct: 487 CVSRQHWWGHRVPAWYVTLEDDQEKTLGSDNDRWIVAKSESAASVEAQKSYP 538
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 83 LDGTXDNMLEPS-TKMPWFKGWQVER 157
L GT D ++ P TKMPW+ ++ +R
Sbjct: 268 LCGTPDELIWPGVTKMPWYNNFKPQR 293
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,490,866
Number of Sequences: 37544
Number of extensions: 392475
Number of successful extensions: 1629
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1619
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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