Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31892
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 239 6e-64
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 239 6e-64
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 239 6e-64
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 57 6e-09
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 56 1e-08
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 56 1e-08
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 56 1e-08
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 50 7e-07
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 50 7e-07
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 46 1e-05
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 44 5e-05
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 43 1e-04
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 34 0.068
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 31 0.48
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 31 0.48
AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical... 31 0.48
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 31 0.48
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 31 0.48
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 1.1
Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical p... 29 1.5
AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical ... 29 1.5
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 29 2.6
U43283-3|AAC69024.2| 880|Caenorhabditis elegans Hypothetical pr... 28 3.4
U28943-1|AAA68356.1| 635|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 27 5.9
U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical pr... 27 7.8
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 27 7.8
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 27 7.8
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 27 7.8
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 239 bits (586), Expect = 6e-64
Identities = 107/135 (79%), Positives = 120/135 (88%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGG
Sbjct: 165 DNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGG 224
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK
Sbjct: 225 IGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVK 284
Query: 458 ELRRGYVAGDSKNNP 502
++RRG V DSK +P
Sbjct: 285 DIRRGSVCSDSKQDP 299
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1
Query: 19 EVSSYIKKIGYNPAAVAFVPISGWHG 96
EVS +IKKIGYNP AV FVPISG++G
Sbjct: 139 EVSGFIKKIGYNPKAVPFVPISGFNG 164
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 239 bits (586), Expect = 6e-64
Identities = 107/135 (79%), Positives = 120/135 (88%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGG
Sbjct: 199 DNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGG 258
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK
Sbjct: 259 IGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVK 318
Query: 458 ELRRGYVAGDSKNNP 502
++RRG V DSK +P
Sbjct: 319 DIRRGSVCSDSKQDP 333
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1
Query: 19 EVSSYIKKIGYNPAAVAFVPISGWHG 96
EVS +IKKIGYNP AV FVPISG++G
Sbjct: 173 EVSGFIKKIGYNPKAVPFVPISGFNG 198
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 239 bits (586), Expect = 6e-64
Identities = 107/135 (79%), Positives = 120/135 (88%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGG
Sbjct: 199 DNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGG 258
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKNVSVK
Sbjct: 259 IGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVK 318
Query: 458 ELRRGYVAGDSKNNP 502
++RRG V DSK +P
Sbjct: 319 DIRRGSVCSDSKQDP 333
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1
Query: 19 EVSSYIKKIGYNPAAVAFVPISGWHG 96
EVS +IKKIGYNP AV FVPISG++G
Sbjct: 173 EVSGFIKKIGYNPKAVPFVPISGFNG 198
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 57.2 bits (132), Expect = 6e-09
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 176 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 352
G C IE +D +LP R + P+R + + Y +GTV +G++E+G ++ G +V P
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMPN 375
Query: 353 NITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 478
+V + + V GDN+ F +K + EL+ G++
Sbjct: 376 KQPVQVLQIWADDVETERVVAGDNIKFKLKGIEENELQGGFI 417
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 56.0 bits (129), Expect = 1e-08
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Frame = +2
Query: 164 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TI 334
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I
Sbjct: 226 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKI 284
Query: 335 VVFAPANITTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 478
+ T VKSV E + + +A PGD +G ++ + K++RRG V
Sbjct: 285 EIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCV 336
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 56.0 bits (129), Expect = 1e-08
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Frame = +2
Query: 164 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TI 334
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I
Sbjct: 227 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKI 285
Query: 335 VVFAPANITTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 478
+ T VKSV E + + +A PGD +G ++ + K++RRG V
Sbjct: 286 EIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCV 337
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 56.0 bits (129), Expect = 1e-08
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Frame = +2
Query: 164 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TI 334
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G I
Sbjct: 227 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKI 285
Query: 335 VVFAPANITTEVKSV----EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 478
+ T VKSV E + + +A PGD +G ++ + K++RRG V
Sbjct: 286 EIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCV 337
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 50.4 bits (115), Expect = 7e-07
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Frame = +2
Query: 128 PWFKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 298
P +G + EG+ D C LI+ALD++ P R +P+ I G GTV VG
Sbjct: 201 PVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVG 259
Query: 299 RVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 472
+E GVLK G V + T +++ ++++E GD+ G + V ++RG
Sbjct: 260 TLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGDHCGVLCRGVKGDTVKRG 319
Query: 473 YVAG 484
AG
Sbjct: 320 MWAG 323
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 50.4 bits (115), Expect = 7e-07
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Frame = +2
Query: 128 PWFKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 298
P +G + EG+ D C LI+ALD++ P R +P+ I G GTV VG
Sbjct: 201 PVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVG 259
Query: 299 RVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 472
+E GVLK G V + T +++ ++++E GD+ G + V ++RG
Sbjct: 260 TLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGDHCGVLCRGVKGDTVKRG 319
Query: 473 YVAG 484
AG
Sbjct: 320 MWAG 323
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/85 (27%), Positives = 45/85 (52%)
Frame = +2
Query: 173 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 352
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ +
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMS 429
Query: 353 NITTEVKSVEMHHEALQEAVPGDNV 427
++T +++ + GD +
Sbjct: 430 SVTAATVKECANNDGSRHCFAGDYI 454
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/85 (27%), Positives = 45/85 (52%)
Frame = +2
Query: 173 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 352
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ +
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMS 447
Query: 353 NITTEVKSVEMHHEALQEAVPGDNV 427
++T +++ + GD +
Sbjct: 448 SVTAATVKECANNDGSRHCFAGDYI 472
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/70 (40%), Positives = 34/70 (48%)
Frame = +3
Query: 99 TTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKTYTKSVV 278
TTC C GSRDG + +K L E S +L PS H A LT VF + T+S
Sbjct: 182 TTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQLTDHSVFHSRMCTRSEE 241
Query: 279 LVPCPSAELK 308
L P S L+
Sbjct: 242 LEPSQSDVLR 251
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 44.4 bits (100), Expect = 5e-05
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Frame = +2
Query: 77 PFLDGTXDNMLEPSTKMPWFKG---WQVERKEGKADGKCLIEALDAILPPARPTDK--PL 241
P L D+++ + P K +QV EG L+ I+P R ++ P
Sbjct: 316 PILVRNMDDVVHAAVNFPSKKVCPIFQVSNVEGT--NLPLLRQFLNIVPLRRQLNENDPA 373
Query: 242 RLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEA 409
+ D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 374 HFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIV 433
Query: 410 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNP 502
G + F +K + K++R+G V D K P
Sbjct: 434 KCGQSASFALKKIPKKDVRKGMVLVDPKVKP 464
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 236 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 403
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVG 432
Query: 404 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNP 502
G + F +K + K++R+G V D K P
Sbjct: 433 IVKCGQSASFALKKIPKKDVRQGMVLVDPKVKP 465
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 35.5 bits (78), Expect = 0.022
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +2
Query: 206 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 385
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 191 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 250
Query: 386 HHEALQEAVPGDNVGFNV 439
+ + + G F V
Sbjct: 251 WKQRVGQVAAGARAAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 35.5 bits (78), Expect = 0.022
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +2
Query: 206 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 385
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 209
Query: 386 HHEALQEAVPGDNVGFNV 439
+ + + G F V
Sbjct: 210 WKQRVGQVAAGARAAFLV 227
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 33.9 bits (74), Expect = 0.068
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Frame = +2
Query: 236 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITT----EVKSVEMHHEALQ 403
P ++++Y + +G V G + G L G V+ P T V S+ +A+
Sbjct: 402 PAFFTIEELYNVPHVGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVG 461
Query: 404 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 505
PG+ ++ LRRG V + + PP
Sbjct: 462 CVNPGEAASISLNLPDGVSLRRGMVLAEIDHQPP 495
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 31.1 bits (67), Expect = 0.48
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Frame = +2
Query: 26 PHTSRRLATTQLLSLSCPFLDGTXD---------NMLEPSTKMPWFKG 142
PH SR T L+ SCPFLD + +ML + + P FKG
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANEDSEIENEDVDMLANTPQFPLFKG 205
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 31.1 bits (67), Expect = 0.48
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Frame = +2
Query: 26 PHTSRRLATTQLLSLSCPFLDGTXD---------NMLEPSTKMPWFKG 142
PH SR T L+ SCPFLD + +ML + + P FKG
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANEDSEIENEDVDMLANTPQFPLFKG 205
>AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical
protein F16B4.11 protein.
Length = 440
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 57 SCCRF--RAHFWMARXTTCWSLQPKCLGSRDGRWSVKKAKLTE 179
+C F RAHF + C +C+ ++ GRW KK +L +
Sbjct: 50 ACSAFFRRAHFSLVTERKCRLSNGRCVPTKGGRWFCKKCRLAK 92
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 31.1 bits (67), Expect = 0.48
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Frame = +2
Query: 26 PHTSRRLATTQLLSLSCPFLDGTXD---------NMLEPSTKMPWFKG 142
PH SR T L+ SCPFLD + +ML + + P FKG
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANEDSEIENEDVDMLANTPQFPLFKG 205
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 31.1 bits (67), Expect = 0.48
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Frame = +2
Query: 26 PHTSRRLATTQLLSLSCPFLDGTXD---------NMLEPSTKMPWFKG 142
PH SR T L+ SCPFLD + +ML + + P FKG
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANEDSEIENEDVDMLANTPQFPLFKG 205
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 320 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 445
KPGTI F P ITTE K H L+ + GD +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397
>Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/106 (18%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = -3
Query: 399 RASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGR 220
R + +S++ +S+ L + ++ TP TGT PIP +++ + + V +
Sbjct: 214 RKPYIVSSEASSLEDLVTSTGSLTHDHFTPEHQFKTGTAPIPTVVFDDVEEIGKVVKVHK 273
Query: 219 AG---GRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSXV 91
G + + + H ++L S++ C + + G N++ +
Sbjct: 274 EGCPKNKKKNLGPIEH-SNSLISVKQPCKVHANQLPISGINLMDLI 318
>AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/106 (18%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = -3
Query: 399 RASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGR 220
R + +S++ +S+ L + ++ TP TGT PIP +++ + + V +
Sbjct: 214 RKPYIVSSEASSLEDLVTSTGSLTHDHFTPEHQFKTGTAPIPTVVFDDVEEIGKVVKVHK 273
Query: 219 AG---GRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSXV 91
G + + + H ++L S++ C + + G N++ +
Sbjct: 274 EGCPKNKKKNLGPIEH-SNSLISVKQPCKVHANQLPISGINLMDLI 318
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 462 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPT-GT 286
++ T T T T +PGT + +T S GA TT PG V+ PT G
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 285 VPIPPILYTSCRGRRRGL 232
PI+ T+ RG+
Sbjct: 2074 STTQPIITTTKGAEGRGV 2091
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -3
Query: 471 PRRNSLTDTFFTLKPTLSPG-TASWRASWCISTDLTSVVMLAGAKTTMVPGFN--TPVST 301
P + FT +S + S R S +S D T V + + VP + VST
Sbjct: 28 PEDGATVGNTFTQSSAVSESQSTSERTSRSVSPDSTPVRVTTSTLLSTVPTSQDISGVST 87
Query: 300 LPTGTVPIPPILY 262
PT +PPI Y
Sbjct: 88 APTTKATLPPITY 100
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 462 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPT-GT 286
++ T T T T +PGT + +T S GA TT PG V+ PT G
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 285 VPIPPILYTSCRGRRRGL 232
PI+ T+ RG+
Sbjct: 2074 STTQPIITTTKGAEGRGV 2091
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 462 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPT-GT 286
++ T T T T +PGT + +T S GA TT PG V+ PT G
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 285 VPIPPILYTSCRGRRRGL 232
PI+ T+ RG+
Sbjct: 2074 STTQPIITTTKGAEGRGV 2091
>U43283-3|AAC69024.2| 880|Caenorhabditis elegans Hypothetical
protein T25G12.6 protein.
Length = 880
Score = 28.3 bits (60), Expect = 3.4
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Frame = -3
Query: 387 CISTDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLS---VGRA 217
C S ++++ +G T V TP +++PTG P + TS R
Sbjct: 194 CRSVSDSTLITTSGPSGTTVTVPTTPCASVPTGPTKTPVTVPTSTGSVSRETKSPVTANP 253
Query: 216 GGRMASRASMRHFPSALPSLRSTCHPLNQG-------ILVEGSNMLSXVPSRNGHESDSS 58
G +++ S + S RST P + IL++ SN + + N S
Sbjct: 254 GSTVSTSLSSKPVTVVTQSPRSTTTPFVKTPYSKDVIILLDNSNAMKSFTNFN---LVKS 310
Query: 57 WVVANLL 37
W+V LL
Sbjct: 311 WIVKTLL 317
>U28943-1|AAA68356.1| 635|Caenorhabditis elegans Hypothetical
protein E04F6.4 protein.
Length = 635
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 16 KEVSSYIKKIGYNPA-AVAFVPISGWHGRQHVGAFNQNALVQGM 144
+++ Y + GY P + P SGW G +G FN+ G+
Sbjct: 574 QKLQKYGESKGYLPKISKPSNPFSGWFGFDQIGVFNEKYSADGL 617
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 336 TMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRM 205
++V G N + +PT T P+ P + +S R +R S G M
Sbjct: 332 SLVEGLNGSPTPIPTVTDPVNPTVNSSTRRKRHSSSKSSNGKSM 375
>U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical
protein T10E9.2 protein.
Length = 720
Score = 27.1 bits (57), Expect = 7.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 319 ETRYHCCLCPRQH 357
E ++ CCLCPR H
Sbjct: 346 EFKWRCCLCPRAH 358
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +2
Query: 374 SVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSK 493
+++M + + A GD+ G+ + N+ ++L RG+ D +
Sbjct: 268 AIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDER 307
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +2
Query: 374 SVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSK 493
+++M + + A GD+ G+ + N+ ++L RG+ D +
Sbjct: 268 AIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSPSDER 307
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = -2
Query: 364 SSDVGGGKDNNGTWF--QHTS---FNSADGHGTNTTDFVY 260
S +V GK ++G W Q TS F DGH T T V+
Sbjct: 97 SLNVAAGKTHSGVWLGAQRTSATAFRWTDGHTTGTEAMVF 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,081,300
Number of Sequences: 27780
Number of extensions: 295417
Number of successful extensions: 962
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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