Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31892
(506 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 269 1e-74
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 261 3e-72
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 257 4e-71
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 93 1e-21
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 93 2e-21
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 21 9.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 269 bits (659), Expect = 1e-74
Identities = 124/136 (91%), Positives = 128/136 (94%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGG
Sbjct: 199 DNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGG 258
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETGVLKPG +V FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK
Sbjct: 259 IGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 318
Query: 458 ELRRGYVAGDSKNNPP 505
ELRRGYVAGDSKNNPP
Sbjct: 319 ELRRGYVAGDSKNNPP 334
Score = 62.5 bits (145), Expect = 2e-12
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 16 KEVSSYIKKIGYNPAAVAFVPISGWHG 96
KEVSSYIKKIGYNPAAVAFVPISGWHG
Sbjct: 172 KEVSSYIKKIGYNPAAVAFVPISGWHG 198
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 261 bits (639), Expect = 3e-72
Identities = 121/133 (90%), Positives = 125/133 (93%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGG
Sbjct: 142 DNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGG 201
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETGVLKPG +V FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK
Sbjct: 202 IGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 261
Query: 458 ELRRGYVAGDSKN 496
ELRRGYVAGDSKN
Sbjct: 262 ELRRGYVAGDSKN 274
Score = 62.5 bits (145), Expect = 2e-12
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 16 KEVSSYIKKIGYNPAAVAFVPISGWHG 96
KEVSSYIKKIGYNPAAVAFVPISGWHG
Sbjct: 115 KEVSSYIKKIGYNPAAVAFVPISGWHG 141
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 257 bits (630), Expect = 4e-71
Identities = 117/136 (86%), Positives = 126/136 (92%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGG 277
DNMLEPS K PW+KGW+VERK+G ADGK LIEALDAILPP+RPTDK LRLPLQDVYKIGG
Sbjct: 199 DNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKALRLPLQDVYKIGG 258
Query: 278 IGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVK 457
IGTVPVGRVETG+LKPG +V FAPA +TTEVKSVEMHHEAL EA+PGDNVGFNVKN+SVK
Sbjct: 259 IGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVK 318
Query: 458 ELRRGYVAGDSKNNPP 505
ELRRGYVAGDSKN PP
Sbjct: 319 ELRRGYVAGDSKNQPP 334
Score = 58.0 bits (134), Expect = 5e-11
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 16 KEVSSYIKKIGYNPAAVAFVPISGWHG 96
KEVSSYIKKIGYN A+VAFVPISGWHG
Sbjct: 172 KEVSSYIKKIGYNTASVAFVPISGWHG 198
Score = 21.8 bits (44), Expect = 4.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 423 LSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFN 316
L PG A ++T++ SV M A T +PG N
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDN 307
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 93.5 bits (222), Expect = 1e-21
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +2
Query: 98 DNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 235
DNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RPTDK
Sbjct: 126 DNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 171
Score = 62.5 bits (145), Expect = 2e-12
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 16 KEVSSYIKKIGYNPAAVAFVPISGWHG 96
KEVSSYIKKIGYNPAAVAFVPISGWHG
Sbjct: 99 KEVSSYIKKIGYNPAAVAFVPISGWHG 125
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 92.7 bits (220), Expect = 2e-21
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +2
Query: 371 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 505
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPP 45
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 20.6 bits (41), Expect = 9.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 348 GAKTTMVPGFNTPVST 301
GA ++MVPGF + ++
Sbjct: 113 GATSSMVPGFGSTAAS 128
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,240
Number of Sequences: 438
Number of extensions: 3206
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -