Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31891
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 364 e-101
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 363 e-101
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 363 e-101
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 363 e-101
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 363 e-101
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 363 e-101
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 363 e-101
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 362 e-101
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 357 3e-99
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 337 2e-93
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 283 5e-77
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 229 7e-61
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 188 3e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 173 5e-44
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 173 5e-44
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 173 5e-44
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 168 2e-42
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 150 5e-37
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 114 3e-26
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 51 4e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 51 4e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.37
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.37
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.1
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 1.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.6
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 4.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 6.0
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 6.0
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 6.0
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 6.0
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 6.0
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 364 bits (895), Expect = e-101
Identities = 168/171 (98%), Positives = 171/171 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
TLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 515
TFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 363 bits (894), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
TLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 515
TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 363 bits (894), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
TLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 515
TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 363 bits (894), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
TLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 515
TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 363 bits (894), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
TLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 515
TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 363 bits (894), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
TLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 515
TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 363 bits (894), Expect = e-101
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
TLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 515
TFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 177
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 362 bits (891), Expect = e-101
Identities = 166/171 (97%), Positives = 171/171 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
TLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 515
TFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIL 177
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 357 bits (878), Expect = 3e-99
Identities = 163/170 (95%), Positives = 169/170 (99%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 6 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
TLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFE
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFE 125
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 512
TFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI
Sbjct: 126 TFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAI 175
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 337 bits (829), Expect = 2e-93
Identities = 154/159 (96%), Positives = 159/159 (100%)
Frame = +3
Query: 39 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 218
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 219 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 398
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 399 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 515
AVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAIL
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAIL 163
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 283 bits (694), Expect = 5e-77
Identities = 129/133 (96%), Positives = 133/133 (100%)
Frame = +3
Query: 117 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 296
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 297 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 476
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 477 PIYEGYALPHAIL 515
PIYEGYALPHAIL
Sbjct: 121 PIYEGYALPHAIL 133
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 229 bits (561), Expect = 7e-61
Identities = 99/169 (58%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
Frame = +3
Query: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 188
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 189 KYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 365
+YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 366 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 512
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAI 179
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 188 bits (457), Expect = 3e-48
Identities = 89/169 (52%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
Frame = +3
Query: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 182
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 359
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 360 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 506
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHH 177
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 173 bits (422), Expect = 5e-44
Identities = 79/80 (98%), Positives = 80/80 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKI 242
TLKYPIEHGI+TNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 173 bits (422), Expect = 5e-44
Identities = 79/80 (98%), Positives = 80/80 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKI 242
TLKYPIEHGI+TNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 173 bits (422), Expect = 5e-44
Identities = 79/80 (98%), Positives = 80/80 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDMEKI 242
TLKYPIEHGI+TNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 168 bits (408), Expect = 2e-42
Identities = 76/77 (98%), Positives = 77/77 (100%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 183 TLKYPIEHGIITNWDDM 233
TLKYPIEHGI+TNWDDM
Sbjct: 67 TLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 150 bits (364), Expect = 5e-37
Identities = 81/190 (42%), Positives = 110/190 (57%), Gaps = 21/190 (11%)
Frame = +3
Query: 6 ALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGMGQKDSYV 149
A V+DNG+G K G+AG+ P+ + PS V Q V G+ D ++
Sbjct: 8 ACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFI 67
Query: 150 GDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 326
GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 68 GDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTP 127
Query: 327 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI 482
NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+
Sbjct: 128 ENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPV 187
Query: 483 YEGYALPHAI 512
+GY + I
Sbjct: 188 ADGYVIGSCI 197
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 114 bits (275), Expect = 3e-26
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 17/188 (9%)
Frame = +3
Query: 3 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QSKR- 173
+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+KR
Sbjct: 12 SGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKRE 71
Query: 174 -----GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 311
G + P ++ G+I +W+ EKI H++ N L P EHPVL +E+
Sbjct: 72 KNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSES 131
Query: 312 PLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 491
N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++G
Sbjct: 132 SWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDG 191
Query: 492 YALPHAIL 515
YA+ HA++
Sbjct: 192 YAVTHAVV 199
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.2 bits (117), Expect = 4e-07
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Frame = +3
Query: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 188
++ DNG K G ++PR V SIV + +H+ V + + +E K + +
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYV 60
Query: 189 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 368
+ PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 61 R-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Query: 369 NSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAIL 515
++ + L S + +V+DSG + G + +++
Sbjct: 119 GFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVI 171
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.2 bits (117), Expect = 4e-07
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Frame = +3
Query: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 188
++ DNG K G ++PR V SIV + +H+ V + + +E K + +
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYV 60
Query: 189 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 368
+ PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 61 R-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Query: 369 NSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAIL 515
++ + L S + +V+DSG + G + +++
Sbjct: 119 GFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVI 171
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 50.8 bits (116), Expect = 6e-07
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Frame = +3
Query: 9 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 182
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 183 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 362
+E I D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 363 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 512
+ + Q L LYA TTG+V+D G+ V + VP+ +GY + AI
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAI 347
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 463 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 368
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 16 STMAPACARPVSPATTRPAPSSRP 87
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.37
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 150 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 329
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 330 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 482
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 7 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 114
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 130 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 20
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 39 KAGFAGDDAPRAVFPSIVGRPRHQG 113
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 16 STMAPACARPVSPATTRPAPSSRPSWVALATRA 114
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 180 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 97
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 180 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 97
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 180 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 97
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 180 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 97
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 180 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 97
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 284 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 117
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 284 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 117
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 284 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 117
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,159,167
Number of Sequences: 27780
Number of extensions: 236505
Number of successful extensions: 1254
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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