Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31890
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    37   0.24 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    35   1.3  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    33   3.9  
UniRef50_Q1R055 Cluster: Transcriptional regulator, AraC family;...    33   5.1  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 37.1 bits (82), Expect = 0.24
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 463 RGGARYPIRPIVSRIT 510
           RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = -1

Query: 78  RYLIFIYLLLPRCVDELTAHLVLSGY 1
           R+ +  +LLL R VDELTAHLVLSGY
Sbjct: 148 RFCLSRFLLL-RWVDELTAHLVLSGY 172


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -3

Query: 505 YDSL*GELGTGPPLE 461
           YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292


>UniRef50_Q1R055 Cluster: Transcriptional regulator, AraC family;
           n=2; Chromohalobacter salexigens|Rep: Transcriptional
           regulator, AraC family - Chromohalobacter salexigens
           (strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
          Length = 341

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 87  CTLAGNKRLSILYLFIAHMGQTCRQWYL 170
           C LAG  +  +  LF+AH G+T +Q YL
Sbjct: 260 CRLAGQSQRQLTRLFVAHFGETPKQCYL 287


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,826,528
Number of Sequences: 1657284
Number of extensions: 7804701
Number of successful extensions: 12136
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12136
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)