Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31890
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               26   0.20 
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   3.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   10.0 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   10.0 
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   10.0 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   10.0 

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +1

Query: 106 KGFLFYIYLLLIWVKLAGNGI*SVTRAQGNHQSEIHYC 219
           K  + ++Y+L + V +  NGI  + +       +I YC
Sbjct: 3   KFLVIFVYILSVAVIIRANGINEILKIMAVSMKDIRYC 40


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 217 CFTSEKYSACTMSY 258
           C T++K+S C + Y
Sbjct: 111 CLTAQKFSRCVIDY 124


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +3

Query: 267 IFRPCVP*IMTIYTMFSMCPDICLLDNI 350
           +F  C      +Y +   CPD C  D +
Sbjct: 335 VFVVCWLPFFLMYVIVPFCPDCCPSDRM 362


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +3

Query: 267 IFRPCVP*IMTIYTMFSMCPDICLLDNI 350
           +F  C      +Y +   CPD C  D +
Sbjct: 335 VFVVCWLPFFLMYVIVPFCPDCCPSDRM 362


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 125 FIYCSYGSNLPAMVFNLSLEPREIIKVKFIT 217
           F+Y S   N          EP + I++ FIT
Sbjct: 80  FLYTSKNDNEEVCGIYFLAEPDQKIEINFIT 110


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +3

Query: 267 IFRPCVP*IMTIYTMFSMCPDICLLDNI 350
           +F  C      +Y +   CPD C  D +
Sbjct: 335 VFVVCWLPFFLMYVIVPFCPDCCPSDRM 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,214
Number of Sequences: 438
Number of extensions: 2359
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)