Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31890
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR...    28   3.2  
At3g60810.2 68416.m06803 expressed protein                             28   3.2  
At3g60810.1 68416.m06802 expressed protein                             28   3.2  
At5g59616.1 68418.m07473 protein kinase-related contains similar...    28   4.3  
At3g17740.1 68416.m02264 expressed protein                             27   9.9  
At2g31350.2 68415.m03830 hydroxyacylglutathione hydrolase, putat...    27   9.9  
At2g31350.1 68415.m03829 hydroxyacylglutathione hydrolase, putat...    27   9.9  

>At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1607

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +2

Query: 122  IFIYCSYGSNLPAMVFNLSLEPREIIKVKFITASRQKNTVLAQCPTT 262
            +F++C +  +L A   N S    +++  +F T ++QK  +   C  T
Sbjct: 1384 MFVFCDFDMHLTACEGNDSSILADLVVFEFFTVNKQKKLLDGSCAVT 1430


>At3g60810.2 68416.m06803 expressed protein 
          Length = 209

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 227 QKNTVLAQCPTTSNI*TLCSMNNDNIHY 310
           QKN  LA CP T+N  +     +D +HY
Sbjct: 70  QKNERLALCPATNNCISTSENISDRVHY 97


>At3g60810.1 68416.m06802 expressed protein 
          Length = 214

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 227 QKNTVLAQCPTTSNI*TLCSMNNDNIHY 310
           QKN  LA CP T+N  +     +D +HY
Sbjct: 75  QKNERLALCPATNNCISTSENISDRVHY 102


>At5g59616.1 68418.m07473 protein kinase-related contains similarity
           to light repressible receptor protein kinase
           [Arabidopsis thaliana] gi|1321686|emb|CAA66376
          Length = 153

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 264 VIFRPCVP*IMTIYTMFSMCPDIC 335
           VI  P +P   TIYT+FS  P  C
Sbjct: 40  VIADPLIPPKFTIYTIFSQSPSTC 63


>At3g17740.1 68416.m02264 expressed protein
          Length = 1149

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 69  LNTYLFCTLAGNKRLSILYLFIAHMGQTCRQW 164
           +N YLF   +   RLS++Y FI   G     W
Sbjct: 646 INGYLFSLRSKEARLSLVYQFIDFFGAHISPW 677


>At2g31350.2 68415.m03830 hydroxyacylglutathione hydrolase, putative
           / glyoxalase II, putative similar to glyoxalase II
           isozyme [Arabidopsis thaliana] gi|2570338|gb|AAC49865
          Length = 323

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
 Frame = +2

Query: 128 IYCSYGSNLPAMVFNLSLEP-REIIKVKFITASRQKNTVLAQCPTTSNI*TLCS----MN 292
           IYC +   L    F LSLEP  E+++      +  ++  L   PTT  +   C+     +
Sbjct: 234 IYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSS 293

Query: 293 NDNIHYVFNVP 325
           N +I     +P
Sbjct: 294 NTDIRRALRIP 304


>At2g31350.1 68415.m03829 hydroxyacylglutathione hydrolase, putative
           / glyoxalase II, putative similar to glyoxalase II
           isozyme [Arabidopsis thaliana] gi|2570338|gb|AAC49865
          Length = 324

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
 Frame = +2

Query: 128 IYCSYGSNLPAMVFNLSLEP-REIIKVKFITASRQKNTVLAQCPTTSNI*TLCS----MN 292
           IYC +   L    F LSLEP  E+++      +  ++  L   PTT  +   C+     +
Sbjct: 235 IYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSS 294

Query: 293 NDNIHYVFNVP 325
           N +I     +P
Sbjct: 295 NTDIRRALRIP 305


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,804,429
Number of Sequences: 28952
Number of extensions: 171646
Number of successful extensions: 252
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)