Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31888
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    26   0.26 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.46 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.7  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   7.5  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    21   7.5  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    21   7.5  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    21   7.5  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    21   7.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.5  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    21   7.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    21   10.0 
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    21   10.0 
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    21   10.0 
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    21   10.0 
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    21   10.0 
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   10.0 
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   10.0 
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   10.0 
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   10.0 
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   10.0 
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   10.0 

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 18/83 (21%), Positives = 37/83 (44%)
 Frame = +3

Query: 213  KKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSG 392
            K L  V +   +NK +   + K+   K+++ TAT  +    +RK Q+  E+ +   +   
Sbjct: 766  KALLPVIKPANVNKEQSPNSTKETTPKKERKTATTTQPVISSRKEQKKSEE-KNINDHCV 824

Query: 393  TAQQKLLEAQQSADENNRMCKVL 461
            T +Q ++    +   N     V+
Sbjct: 825  TTEQSVVVTNVTTTINTPTTSVI 847


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -1

Query: 294 PSLQGPCWPAPACSCSGSGLPPPGRASSGVRGLPRLPSQHG 172
           PS   P  P P  S + SG+PP       +  +P +PS  G
Sbjct: 411 PSAGAPMPPIPNMS-NMSGMPPLPNMPGSMPTMPTMPSMAG 450


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 14/76 (18%), Positives = 33/76 (43%)
 Frame = +3

Query: 198 VRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKS 377
           +REL KK+  +     L+  KL       ++++ Q      +     + V   ++  ++ 
Sbjct: 385 LRELLKKIPDLRTLNTLHSEKLLAFKMTEQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQ 444

Query: 378 EERSGTAQQKLLEAQQ 425
           +++    QQ+  + QQ
Sbjct: 445 QQQQQQQQQQQQQQQQ 460


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -3

Query: 445 RLFSSA-DCWASSSFCWAV 392
           R F+SA D W+    CW V
Sbjct: 813 RKFTSASDVWSMGIVCWEV 831


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 16  DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 74


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 249 DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 307


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 147 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           ++Q    +   EK  EE    ++     E +  L KNK E        KE+    TE E
Sbjct: 249 DRQYEKLHNEKEKFLEERTSRKRYSRSREREQKLYKNKREYRKYRETSKERSRNRTERE 307


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -1

Query: 138 RPCPWHC 118
           +PCPW C
Sbjct: 233 KPCPWIC 239


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 312 TEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLE 416
           TEAE   LN+K  +  E   K+ +R    +  L E
Sbjct: 130 TEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEE 164


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 267 APACSCSGSGLPPPGRASSGVR 202
           AP+C    + L  PG  S G+R
Sbjct: 367 APSCGGGPTILTTPGLDSDGIR 388


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 191 RGSPRTPEEARP 226
           RG+  TPEE RP
Sbjct: 12  RGNGGTPEEKRP 23


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 27  EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 74


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 27  EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 74


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 27  EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 74


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 27  EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 74


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 260 EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 307


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 260 EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 307


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 260 EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 307


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 260 EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 307


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 260 EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 307


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 180 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAE 323
           EK+ EE    ++     E +  L KN+ E        KE+    TE E
Sbjct: 249 EKLLEERTSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTERE 296


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,952
Number of Sequences: 438
Number of extensions: 2650
Number of successful extensions: 30
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)