Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31886
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 33 0.10
12_01_0402 - 3179365-3180343,3180907-3182530,3183357-3183768 33 0.14
04_03_0151 + 11905926-11906618 28 3.9
01_01_0842 - 6571432-6571487,6571586-6571675,6571967-6572274,657... 28 3.9
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 28 5.1
01_06_1196 + 35322662-35324212 28 5.1
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 27 6.8
10_08_0875 + 21212413-21212758,21215931-21217357 27 6.8
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 27 6.8
05_03_0515 + 14930736-14932697 27 6.8
05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337... 27 6.8
12_02_1270 + 27466516-27466621,27466722-27466885,27467385-274681... 27 8.9
09_02_0338 + 7426999-7428322,7428390-7428646 27 8.9
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 33.5 bits (73), Expect = 0.10
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -1
Query: 123 KLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQ 19
+LK EVT +++K+QIQ+ ELE + A+ + LQ
Sbjct: 755 ELKKEVTSLERKIQIQVQELEQKREEADAMHAQLQ 789
Score = 30.7 bits (66), Expect = 0.73
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 123 KLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQ 19
+LK EVT ++ K+QIQ ELE + A+ + LQ
Sbjct: 681 ELKKEVTSLELKIQIQAQELEQKREEADTVHAQLQ 715
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 123 KLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQ 19
+LK EVT ++ K+QI + ELE + A+ + LQ
Sbjct: 607 ELKKEVTSLEVKIQILVQELEQKREEADVMHAQLQ 641
>12_01_0402 - 3179365-3180343,3180907-3182530,3183357-3183768
Length = 1004
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 183 TKRQRQN-KR*VRSISENATT--LLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTE 353
T+ QN + +++ SEN T +L + D +P HP N NAQ + +
Sbjct: 390 TENSSQNIAKKLQTASENPPTFAVLSSRSDVLPEDQKEHPAA--NLNAQIESPEDHKEVD 447
Query: 354 PTESSGRPQSSSI 392
PT +SG P SS +
Sbjct: 448 PTTASGIPSSSGV 460
>04_03_0151 + 11905926-11906618
Length = 230
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 228 ENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTR 341
+ +TLL HP +S P HP V++SNA + R
Sbjct: 148 QRGSTLLRQHPRQA-SSAPGHPAVVSSSNAPRIAPIQR 184
>01_01_0842 -
6571432-6571487,6571586-6571675,6571967-6572274,
6572872-6573037,6573659-6573841,6574321-6574426,
6574537-6574701,6575202-6575262,6577147-6577208
Length = 398
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 261 DAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRARCDHS 440
+ +PA+G HP+++N+ N + N T G S+ + SP+ A +H+
Sbjct: 230 NGIPAAGGYHPIRMNSGNDM----VVDNGAPETAHVGATCSAMSSEMAVSPSSAASSNHA 285
Query: 441 KF 446
F
Sbjct: 286 PF 287
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 1 PSSKQSLEVNVGLVGHIKREFQFSNLDLQLLLDACDFRLQFSLGDSNDKC 150
PS+ + E + L+ + E Q SN D + DAC L G++N C
Sbjct: 332 PSASGAPEPSQALLKGLHEEIQSSNSDTNVTEDACADELANDGGENNLDC 381
>01_06_1196 + 35322662-35324212
Length = 516
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 403 TNPLLVEQDVTTPSFPDSVSEGDVKLDKKVGDSVAA 510
T+P+L E +T P+ D +G V ++++ D + A
Sbjct: 10 TSPILTEYHITVPALHDGSMQGSVHHERRLLDCLRA 45
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 27.5 bits (58), Expect = 6.8
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +3
Query: 246 LEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRA 425
++A PDA P + +N S+A T+ PT SS R ++ S H HE P
Sbjct: 74 VDAVPDAAPQLSSGNHAHMN-SDAD--ATVLHASRLPTHSSSRDETKSNHTAHE-PESGG 129
Query: 426 RCDHSK 443
D +K
Sbjct: 130 DADDTK 135
>10_08_0875 + 21212413-21212758,21215931-21217357
Length = 590
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 125 VSAIRTINVDFLGRKINNYHKKAASK*KVSTFNKRKCYDAARSTSRRCTGVRASPSASS 301
+S + N F INN KA S +S +K + + C +RASP +S
Sbjct: 376 ISVSKDGNTTFFQESINNEIDKAQSSDLISVSSKHLIAETPHVDNIVCPELRASPDGAS 434
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 345 QTEPTESSGRPQSSSIHPLHESPA 416
Q +P E++GR SSS+ P ES A
Sbjct: 9 QPQPQEAAGREASSSLSPAKESAA 32
>05_03_0515 + 14930736-14932697
Length = 653
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 183 TKRQRQNKR*VRSISENATTLLEAHPDAVPASGPV 287
T+ +R R+ISE LL HP+ +P SG V
Sbjct: 475 TRERRHLMDACRTISEYMCYLLVVHPEMLPVSGSV 509
>05_03_0359 - 12929240-12929376,12931379-12933497,12933594-12933773,
12933905-12934118,12934199-12934551,12934642-12934864,
12934953-12935230,12935456-12935725,12935817-12935939,
12936025-12936102,12936351-12936527,12936597-12936686,
12937010-12937120,12937397-12937585,12937667-12937858,
12937990-12938076,12938153-12938257,12938340-12938396,
12938471-12938545,12938647-12938763,12938876-12939000,
12939082-12939121,12939241-12939291,12939382-12939569,
12939808-12939901,12939976-12940149,12940242-12940337,
12940597-12940689,12940794-12940955,12941034-12941240,
12941356-12941728,12942379-12942436,12943096-12943171,
12943874-12943941,12944321-12944642
Length = 2433
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 216 RSISENATTLLEAHPDAVPASGPVHPLQVNN 308
R + + + L HP A PA+GP+H + +NN
Sbjct: 1625 REMEDKESRKLVYHP-ATPAAGPLHGVALNN 1654
>12_02_1270 +
27466516-27466621,27466722-27466885,27467385-27468173,
27468263-27468479,27469078-27469256,27470233-27470474,
27470607-27470994
Length = 694
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 289 WTGPDAGTASGCASSSVVAFS 227
WTG +A +SG SSS+++FS
Sbjct: 578 WTGTEAPESSGNYSSSLISFS 598
>09_02_0338 + 7426999-7428322,7428390-7428646
Length = 526
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 470 SPSETESGKLGVVTSCSTSRGFVKWMDAT 384
S T+ VV SC+++ GF +W AT
Sbjct: 234 SEKPTKGAAAHVVVSCASTPGFYRWRPAT 262
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,366,182
Number of Sequences: 37544
Number of extensions: 292515
Number of successful extensions: 929
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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