Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31886
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.9  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   3.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   3.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   4.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 373  AHNQVASIHFTNPLLVEQDVTTPSFP 450
            A+NQV S   + PLL +     PS P
Sbjct: 1089 AYNQVGSGPLSEPLLTQTMEDVPSIP 1114


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 373  AHNQVASIHFTNPLLVEQDVTTPSFP 450
            A+NQV S   + PLL +     PS P
Sbjct: 1085 AYNQVGSGPLSEPLLTQTMEDVPSIP 1110


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 146 NVDFLGRKINNYHKKAASK 202
           ++D L RKI  Y+ +AASK
Sbjct: 380 SIDTLARKILGYNLEAASK 398


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 146 NVDFLGRKINNYHKKAASK 202
           ++D L RKI  Y+ +AASK
Sbjct: 380 SIDTLARKILGYNLEAASK 398


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 212 LPFILTLPFCG 180
           +P I+ LPFCG
Sbjct: 20  IPVIIQLPFCG 30


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
 Frame = +2

Query: 8   VSSLWRSMLVLLATSRESSSSVIWICNFFLMRV----TSDFNLVSAIRTINVD 154
           VS    + LV  +   E   S IW C FF M +     S F  V    T  VD
Sbjct: 353 VSGPGLAFLVYPSAVLELPGSSIWSCLFFFMLILIGLDSQFCTVEGFITAAVD 405


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 323 YLHPYTQPN*TNRELWSPTIK 385
           YL+  T  N   R  WS T+K
Sbjct: 378 YLYQNTMSNNNQRTEWSATVK 398


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 323 YLHPYTQPN*TNRELWSPTIK 385
           YL+  T  N   R  WS T+K
Sbjct: 416 YLYQNTMSNNNQRTEWSATVK 436


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
 Frame = +2

Query: 26  SMLVLLATSRESSSSVIWICNFFLMRV----TSDFNLVSAIRTINVD 154
           + LV  +   E   S IW C FF M +     S F  V    T  VD
Sbjct: 412 AFLVYPSAVLELPGSSIWSCLFFFMLILIGLDSQFCTVEGFITAAVD 458


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 373  RPELSVGSVWL 341
            RP+L  G VWL
Sbjct: 994  RPDLEYGKVWL 1004


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,801
Number of Sequences: 438
Number of extensions: 3074
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)