Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31886
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g75930.1 68414.m08819 family II extracellular lipase 6 (EXL6)...    29   1.9  
At5g56320.1 68418.m07029 expansin, putative (EXP14) similar to a...    29   2.5  
At5g53020.1 68418.m06585 expressed protein                             29   2.5  
At2g25180.1 68415.m03011 two-component responsive regulator fami...    29   2.5  
At5g06800.1 68418.m00768 myb family transcription factor contain...    28   4.3  
At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR...    27   5.7  
At4g00440.1 68417.m00061 expressed protein                             27   5.7  
At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17 si...    27   7.5  
At5g64380.1 68418.m08087 fructose-1,6-bisphosphatase family prot...    27   7.5  
At5g39785.2 68418.m04819 expressed protein                             27   7.5  
At5g39785.1 68418.m04818 expressed protein                             27   7.5  
At5g24800.1 68418.m02928 bZIP transcription factor family protei...    27   7.5  
At3g06550.1 68416.m00761 O-acetyltransferase-related similar to ...    27   7.5  
At5g14620.1 68418.m01714 cytosine methyltransferase (DRM2) ident...    27   9.9  
At4g36030.1 68417.m05129 armadillo/beta-catenin repeat family pr...    27   9.9  
At1g56020.1 68414.m06431 expressed protein                             27   9.9  

>At1g75930.1 68414.m08819 family II extracellular lipase 6 (EXL6)
           EXL6 (PMID:11431566); similar to anter-specific
           proline-rich protein (APG) SP:P40602 [Arabidopsis
           thaliana]
          Length = 343

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 41  LATSRESSSSVIWICNFFLMRVTSDFNL 124
           L   R S   V   CNF L R+T DFN+
Sbjct: 223 LPIHRASFGGVFGWCNFLLNRITEDFNM 250


>At5g56320.1 68418.m07029 expansin, putative (EXP14) similar to
           alpha-expansin 3 GI:6942322 from [Triphysaria
           versicolor]; alpha-expansin gene family, PMID:11641069
          Length = 255

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 193 SVKIKGKYVQ*AKMLRRCSKHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLN 354
           SV IKG   +   M R   ++ Q+  +  GQ++ FK TT   + +   +AT  N
Sbjct: 186 SVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRN 239


>At5g53020.1 68418.m06585 expressed protein
          Length = 721

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = -1

Query: 165 RPKKSTFIVRIAETKLKSEVTRIKKKLQIQITELE-LSLDVANKTNIDLQR 16
           R KK+   +  ++ +L++E++R  K+++ +  ELE LSL++ NK   DL++
Sbjct: 163 RQKKTFLELASSQRQLEAELSRANKQIEAKGHELEDLSLEI-NKMRKDLEQ 212


>At2g25180.1 68415.m03011 two-component responsive regulator family
           protein / response regulator family protein contains
           Pfam profile: PF00072 response regulator receiver domain
          Length = 596

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 19/72 (26%), Positives = 28/72 (38%)
 Frame = +3

Query: 219 SISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHP 398
           S   N   +LE HP A P   P H +     +  N  + + +   P  +S    +S  H 
Sbjct: 403 SAPNNNVVVLEGHPQATPPGFPGHQINKRLEHWSNAVSSSTHPPPPAHNS----NSINHQ 458

Query: 399 LHESPACRARCD 434
              SP   +R D
Sbjct: 459 FDVSPLPHSRPD 470


>At5g06800.1 68418.m00768 myb family transcription factor contains
           Pfam profile: PF00249 myb-like DNA-binding domain
          Length = 375

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +3

Query: 336 TRNQTEPTE-SSGRPQSSSIHPLHESPACRARCDHS 440
           T NQ+ P + SS +P  SS HP H   +     D S
Sbjct: 59  TANQSFPVQCSSSKPYPSSFHPYHHQSSDSPSLDQS 94


>At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR
            class), putative similar to zinc finger protein
            (GI:15811367) [Arabidopsis thaliana]; similar to
            TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana]; similar
            to disease resistance protein RPP1-WsB (GI:3860165)
            [Arabidopsis thaliana]
          Length = 1996

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 159  KKSTFIVRIAETKLKSEVTRIKKKLQIQITELE 61
            KKS  ++    TKL+S++  +K+K   Q TE++
Sbjct: 1723 KKSNGVINKEMTKLQSQIKNLKEKCDNQGTEIQ 1755


>At4g00440.1 68417.m00061 expressed protein 
          Length = 831

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 316 PKILAPLHATKLNQPRALVAHNQVASIHFTNPLLVEQDVTTPSFPDSVSEGDV-KLDKKV 492
           P+ L+PL++      ++  AH + AS  F N + ++++ T  S P+  ++  V  L K+ 
Sbjct: 431 PEYLSPLNSPGRRWEKSSTAHKKSASADFINLVNIKKE-THASQPEENTDIQVCNLSKEP 489

Query: 493 GDSV 504
            DS+
Sbjct: 490 DDSI 493


>At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17
           similar to beta-1,3-glucanase GI:6714534 from [Salix
           gilgiana]
          Length = 380

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 18/79 (22%), Positives = 30/79 (37%)
 Frame = +3

Query: 180 TTKRQRQNKR*VRSISENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPT 359
           TT   R+N R + ++S   TT     P   P + P+H   + + +             P 
Sbjct: 203 TTTMTRRNLRSLVNLSSKFTTSFPTLPSPSPETSPIHS-SIGSPSPPTIPYFPEPSQSPM 261

Query: 360 ESSGRPQSSSIHPLHESPA 416
           ES+         P H +P+
Sbjct: 262 ESNQGISLPPCLPYHPAPS 280


>At5g64380.1 68418.m08087 fructose-1,6-bisphosphatase family protein
           similar to SP|P22418 Fructose-1,6-bisphosphatase,
           chloroplast precursor (EC 3.1.3.11)
           (D-fructose-1,6-bisphosphate 1-phosphohydrolase)
           (FBPase) {Spinacia oleracea}; contains Pfam profile
           PF00316: fructose-1,6-bisphosphatase
          Length = 404

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 250 KHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQVASIHFTNPL--LVE 423
           K+I T+ + +GQ+ +  S      ++A LH T L    A+   + +  ++  NPL  LVE
Sbjct: 291 KYIDTVRQGKGQNPKKYSARYICSLVADLHRTLLYGGVAMNPRDHLRLVYEGNPLAFLVE 350

Query: 424 Q 426
           Q
Sbjct: 351 Q 351


>At5g39785.2 68418.m04819 expressed protein
          Length = 607

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +1

Query: 232 MLRRCSKHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQVASIHFTN 408
           ++RR  KH +     + Q + F S      +   L+ +KL +   +  HN++  I+F N
Sbjct: 536 IIRRFQKHKEE-DSTEDQVLHFFSQVDMKLVTRVLNMSKLTRDHLVWCHNKLTKINFVN 593


>At5g39785.1 68418.m04818 expressed protein
          Length = 606

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +1

Query: 232 MLRRCSKHIQTLYRRQGQSIRFKSTTQTPKILAPLHATKLNQPRALVAHNQVASIHFTN 408
           ++RR  KH +     + Q + F S      +   L+ +KL +   +  HN++  I+F N
Sbjct: 535 IIRRFQKHKEE-DSTEDQVLHFFSQVDMKLVTRVLNMSKLTRDHLVWCHNKLTKINFVN 592


>At5g24800.1 68418.m02928 bZIP transcription factor family protein
           contains Pfam profile: PF00170 bZIP transcription
           factor; identical to cDNA bZIP protein BZO2H2
           GI:10954096
          Length = 277

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +3

Query: 315 AQNTCTLTRNQTEPTESSGRPQSSSIHPLH----ESPACRARCDHSKFPGL 455
           A+ + T + NQ   T  S  P S SI  LH     SPA     D S FPG+
Sbjct: 202 ARGSLTSSLNQLLQTHLS--PPSHSISSLHYTGNTSPAITVHSDQSLFPGM 250


>At3g06550.1 68416.m00761 O-acetyltransferase-related similar to
           O-acetyltransferase (GI:17063556) [Cryptococcus
           neoformans var. neoformans]; contains 7 transmembrane
           domains
          Length = 419

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 247 SSVVAFSLIERTYLLF*RCLFVVIIDFTAQKIYIYRSNRRD 125
           S ++ F L++ ++L+  R     II+F    +Y Y  +R D
Sbjct: 86  SPLIRFVLLDESFLVENRLTLRAIIEFAVLMVYFYICDRTD 126


>At5g14620.1 68418.m01714 cytosine methyltransferase (DRM2)
           identical to cytosine methyltransferase GI:7658293 from
           [Arabidopsis thaliana]
          Length = 626

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 270 PASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS 368
           P S P+H +Q    N       T + + PTE++
Sbjct: 21  PRSSPIHAMQCRVENLAGVAVTTSSLSSPTETT 53


>At4g36030.1 68417.m05129 armadillo/beta-catenin repeat family
           protein contains Pfam profile: PF00514
           armadillo/beta-catenin-like repeat
          Length = 670

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 212 STFNKRKCYDAARSTSRRCTGVRASPSASSQQLKRP 319
           +T NK++C D    T +    +R +  ASS   +RP
Sbjct: 26  ATINKQECADIKSKTEKLAALLRQAARASSDLYERP 61


>At1g56020.1 68414.m06431 expressed protein
          Length = 398

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +3

Query: 228 ENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQ 380
           E+  T+L A  D + + G + PL+ +      T T T   T  TE  G P+
Sbjct: 62  EDPVTMLSA--DELFSDGKLVPLKFSGPKTTTTTTSTTVNTTTTEPRGSPE 110


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,547,107
Number of Sequences: 28952
Number of extensions: 235937
Number of successful extensions: 768
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)