Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31885
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0428 - 3127098-3129254                                           31   0.73 
03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565...    30   1.3  
03_05_0736 - 27254502-27255497                                         28   5.1  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    27   6.8  
09_06_0243 - 21813223-21813456,21814266-21814367,21814501-218147...    27   8.9  
05_04_0345 + 20451497-20451740,20452078-20452159,20452837-204528...    27   8.9  

>02_01_0428 - 3127098-3129254
          Length = 718

 Score = 30.7 bits (66), Expect = 0.73
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 58  ASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGY 177
           A  ++ PTY++SK   P+   + Y+Y I+R + +VA  G+
Sbjct: 523 ARVLILPTYMSSKKDLPALKDWKYEYRILRAEVNVARNGF 562


>03_05_0845 -
           28155065-28155374,28156201-28156342,28156375-28156505,
           28156591-28156784,28156859-28156969,28157234-28157399,
           28157501-28157668,28157766-28158787
          Length = 747

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 247 ENEGIKVKGFYEYVGPDGVTYRVDYTAD 330
           E  G +++G   +VGPDG TYR  + AD
Sbjct: 90  EFRGGRIEGQGVFVGPDGATYRGAWAAD 117


>03_05_0736 - 27254502-27255497
          Length = 331

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +2

Query: 173 ATTTCTRPR--TRFSLKKPARSRTLAPKTKASRS 268
           ATTT + P+  T+F+L + ARS T  P +K+  S
Sbjct: 14  ATTTLSSPQLCTQFALDRVARSTTTIPLSKSKSS 47


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 109 WVGPPCWQRMWV*P 68
           W    CWQRMWV P
Sbjct: 14  WPTASCWQRMWVHP 27


>09_06_0243 -
           21813223-21813456,21814266-21814367,21814501-21814701,
           21815591-21815716,21815791-21816072,21816218-21816388,
           21816838-21816999,21817404-21817467,21818136-21818503
          Length = 569

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 184 LYETENKILAEEAGKVENVGTENEGIKVKGFYEYVGPDGVTYRVDYTADENGFVA 348
           L + E +  A +A + E      + +   G     GPDG T+R      E G VA
Sbjct: 513 LQKIEERTSARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQGVVA 567


>05_04_0345 +
           20451497-20451740,20452078-20452159,20452837-20452882,
           20453669-20454352
          Length = 351

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 50  HTLPARWSHPHTLP 91
           H LP +W+HP T+P
Sbjct: 145 HQLPQKWAHPITMP 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,062,222
Number of Sequences: 37544
Number of extensions: 207230
Number of successful extensions: 577
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)