Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31884
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15218-1|CAA33288.1|  728|Homo sapiens protein ( Human ski oncog...    30   5.5  
AY334557-1|AAP97864.1|  168|Homo sapiens ski oncoprotein protein.      30   5.5  
AL590822-8|CAI12482.1|  728|Homo sapiens v-ski sarcoma viral onc...    30   5.5  
AL162458-3|CAC10457.1| 1342|Homo sapiens zinc finger protein 335...    29   9.7  
AK026157-1|BAB15379.1|  829|Homo sapiens protein ( Homo sapiens ...    29   9.7  
AF395833-1|AAN09900.1| 1342|Homo sapiens zinc-finger/leucine-zip...    29   9.7  

>X15218-1|CAA33288.1|  728|Homo sapiens protein ( Human ski oncogene
           mRNA. ).
          Length = 728

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 395 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 505
           P+   TCT+PR R  ++  P    TLAP       +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480


>AY334557-1|AAP97864.1|  168|Homo sapiens ski oncoprotein protein.
          Length = 168

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 395 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 505
           P+   TCT+PR R  ++  P    TLAP       +DS
Sbjct: 120 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 157


>AL590822-8|CAI12482.1|  728|Homo sapiens v-ski sarcoma viral
           oncogene homolog (avian) protein.
          Length = 728

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 395 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 505
           P+   TCT+PR R  ++  P    TLAP       +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480


>AL162458-3|CAC10457.1| 1342|Homo sapiens zinc finger protein 335
            protein.
          Length = 1342

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 216  GIQHCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGGP 332
            G+QH  P   + Y       HI+ Q+G  THI+ +QG P
Sbjct: 1232 GVQHLLP---QEYVVVPEGHHIQVQEGQITHIQYEQGAP 1267


>AK026157-1|BAB15379.1|  829|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22504 fis, clone HRC11430. ).
          Length = 829

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 216 GIQHCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGGP 332
           G+QH  P   + Y       HI+ Q+G  THI+ +QG P
Sbjct: 719 GVQHLLP---QEYVVVPEGHHIQVQEGQITHIQYEQGAP 754


>AF395833-1|AAN09900.1| 1342|Homo sapiens zinc-finger/leucine-zipper
            co-transducer NIF1 protein.
          Length = 1342

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 216  GIQHCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGGP 332
            G+QH  P   + Y       HI+ Q+G  THI+ +QG P
Sbjct: 1232 GVQHLLP---QEYVVVPEGHHIQVQEGQITHIQYEQGAP 1267


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.309    0.135    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,214,311
Number of Sequences: 237096
Number of extensions: 986298
Number of successful extensions: 5880
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5880
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)