Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31883
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 346 5e-96
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 346 5e-96
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 346 5e-96
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 346 5e-96
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 346 5e-96
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 346 5e-96
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 345 9e-96
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 345 9e-96
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 345 9e-96
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 339 6e-94
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 320 5e-88
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 190 7e-49
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 173 5e-44
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 106 8e-24
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 85 3e-17
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 85 3e-17
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 55 3e-08
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.37
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.0
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.0
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 8.0
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 8.0
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 8.0
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 346 bits (851), Expect = 5e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 278
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 346 bits (851), Expect = 5e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 278
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 346 bits (851), Expect = 5e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 278
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 346 bits (851), Expect = 5e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 115 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 174
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET
Sbjct: 175 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 234
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 235 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 286
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 346 bits (851), Expect = 5e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 145 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 204
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET
Sbjct: 205 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 264
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 265 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 316
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 346 bits (851), Expect = 5e-96
Identities = 163/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 278
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 345 bits (849), Expect = 9e-96
Identities = 162/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 345 bits (849), Expect = 9e-96
Identities = 162/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 345 bits (849), Expect = 9e-96
Identities = 162/172 (94%), Positives = 170/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KIKI
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 339 bits (834), Expect = 6e-94
Identities = 161/172 (93%), Positives = 169/172 (98%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAP T+KIKI
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKI 329
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 320 bits (785), Expect = 5e-88
Identities = 149/172 (86%), Positives = 161/172 (93%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLC
Sbjct: 158 GVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLC 217
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET
Sbjct: 218 YVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHET 277
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI LAPST+KIKI
Sbjct: 278 TYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKI 329
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 190 bits (462), Expect = 7e-49
Identities = 84/163 (51%), Positives = 113/163 (69%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLC
Sbjct: 162 GVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLC 221
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP + +E G+ E
Sbjct: 222 YIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSEL 281
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 489
++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 282 LFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQL 324
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 173 bits (422), Expect = 5e-44
Identities = 85/172 (49%), Positives = 114/172 (66%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE C
Sbjct: 162 GVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENAC 221
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y+ALD T + S++ SY LPD I I N FR PE LF+P +G E G+
Sbjct: 222 YLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHV 276
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+ KI+I
Sbjct: 277 VNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRI 328
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 106 bits (255), Expect = 8e-24
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IKEK C
Sbjct: 180 GVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFC 239
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCPEALFQPSFLGM 336
YV D +E T K DG IT +G ERF PE F P F
Sbjct: 240 YVCPDVMKEF--VKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNP 297
Query: 337 E-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 510
E + I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++ L+ +++
Sbjct: 298 EFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQM 356
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 105 bits (252), Expect = 2e-23
Identities = 53/173 (30%), Positives = 98/173 (56%), Gaps = 6/173 (3%)
Frame = +1
Query: 16 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIVRDIKEKLCYV 186
VP+ +GY + AI + + + D L L+ Y+F + E+ I+R E+ YV
Sbjct: 335 VPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYV 394
Query: 187 ALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMESCGIHE 357
D+++E + T SL+ P Q I N RF C E LF+P G+++ G+H+
Sbjct: 395 PEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQ 454
Query: 358 TVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
++ +I++C +D R+ LY N ++GG ++ PGIA+++++E++ + P+TI ++
Sbjct: 455 LIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQV 507
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 85.0 bits (201), Expect = 3e-17
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 22/184 (11%)
Frame = +1
Query: 31 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 210
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 211 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 324
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 325 FLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTI 504
+ ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEY 340
Query: 505 KIKI 516
+ +
Sbjct: 341 GLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 85.0 bits (201), Expect = 3e-17
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 22/184 (11%)
Frame = +1
Query: 31 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 210
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M
Sbjct: 163 GMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESM 220
Query: 211 ATAA---ASTSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPS 324
A + K Y +PD G V I +G ERF PE LF PS
Sbjct: 221 KEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPS 280
Query: 325 FLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTI 504
+ ++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+
Sbjct: 281 DIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEY 340
Query: 505 KIKI 516
+ +
Sbjct: 341 GLNV 344
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 55.2 bits (127), Expect = 3e-08
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Frame = +1
Query: 16 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT---AEREIVRD-------I 165
VP+++GYA+ HA+++ + G +T+ L ++L ++ T +E V +
Sbjct: 186 VPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGKEEVNEGEAPKWTP 245
Query: 166 KEKLCYVALDFE--------QEMATA---AASTSLEKSY---------ELPDGQVITIGN 285
++ L V ++ ++MA TS++ Y P+G G
Sbjct: 246 RKNLPQVTKSYDAFMKKMLLEDMAATMLQLCDTSIDMDYVDKLPSTPYAFPNGYTKEFGA 305
Query: 286 ERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 450
ER + PE LF +L E + + S D+DIR L++N ++GG ++
Sbjct: 306 ERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLIL 365
Query: 451 GIADRMQKEITALAPSTIKIKI 516
G +R+ + P TIK+++
Sbjct: 366 GFTERLNYALATKCPPTIKLRV 387
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 42.3 bits (95), Expect = 2e-04
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = +1
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 489
++ + KC +D+RK L+ N +++GG + PG+ R+++EI +
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVI 236
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 150 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 16
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 12 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 191
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 192 RLRAG 206
+ AG
Sbjct: 130 QTDAG 134
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +3
Query: 348 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 491
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 114 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 13
+GED V+G V S T GVG S + D G
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 108
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 114 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 13
+GED V+G V S T GVG S + D G
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 205
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 114 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 13
+GED V+G V S T GVG S + D G
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 329
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/82 (24%), Positives = 25/82 (30%)
Frame = +3
Query: 267 GDHHR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHV 446
G+HH P G +G H HHE P H H +HH
Sbjct: 407 GEHHGTHHSPAHHGEHGTHHGHHG-EHHHAPAHHGHHESHGHGHHSPAH-HGHHGEHHHA 464
Query: 447 PRYRRQDAEGDHRPRALDHQDQ 512
P + E H P H +
Sbjct: 465 PAHHGHHGEHHHAPAHHGHHGE 486
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,491,521
Number of Sequences: 27780
Number of extensions: 210373
Number of successful extensions: 693
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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