Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31883
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 317 2e-87
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 317 3e-87
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 317 3e-87
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 309 7e-85
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 308 1e-84
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 308 1e-84
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 308 1e-84
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 306 5e-84
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 305 1e-83
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 296 5e-81
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 257 3e-69
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 256 5e-69
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 175 1e-44
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 93 8e-20
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 87 5e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 87 7e-18
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 79 2e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 71 5e-13
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 60 9e-10
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 53 1e-07
At5g43500.2 68418.m05318 expressed protein 30 0.80
At5g43500.1 68418.m05319 expressed protein 30 0.80
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 1.9
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 1.9
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 2.5
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 2.5
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 4.3
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 5.7
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 7.5
At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel... 27 7.5
At2g06010.1 68415.m00657 expressed protein 27 7.5
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 9.9
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 9.9
At5g35830.1 68418.m04305 ankyrin repeat family protein contains ... 27 9.9
At4g10290.1 68417.m01692 hypothetical protein 27 9.9
At3g28790.1 68416.m03593 expressed protein 27 9.9
At1g69670.1 68414.m08018 cullin, putative contains similarity to... 27 9.9
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 317 bits (779), Expect = 2e-87
Identities = 147/172 (85%), Positives = 160/172 (93%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+KEKL
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLA 219
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y+ALD+EQEM TA S+S+EKSYELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET
Sbjct: 220 YIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHET 279
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK+
Sbjct: 280 TYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKV 331
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 317 bits (778), Expect = 3e-87
Identities = 146/172 (84%), Positives = 161/172 (93%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLC 219
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET
Sbjct: 220 YIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHET 279
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK+
Sbjct: 280 TYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKV 331
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 317 bits (778), Expect = 3e-87
Identities = 146/172 (84%), Positives = 161/172 (93%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLC 219
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET
Sbjct: 220 YIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHET 279
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK+
Sbjct: 280 TYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKV 331
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 309 bits (759), Expect = 7e-85
Identities = 145/172 (84%), Positives = 159/172 (92%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLA 219
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
YVALD+EQE+ TA +S+S+EK+YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET
Sbjct: 220 YVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHET 279
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK+
Sbjct: 280 TYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKV 331
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 308 bits (757), Expect = 1e-84
Identities = 143/172 (83%), Positives = 159/172 (92%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 160 GVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLS 219
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
+VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET
Sbjct: 220 FVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHET 279
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK+
Sbjct: 280 TYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKV 331
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 308 bits (757), Expect = 1e-84
Identities = 143/172 (83%), Positives = 159/172 (92%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 160 GVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLS 219
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
+VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET
Sbjct: 220 FVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHET 279
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK+
Sbjct: 280 TYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKV 331
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 308 bits (757), Expect = 1e-84
Identities = 143/172 (83%), Positives = 159/172 (92%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 160 GVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLS 219
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
+VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET
Sbjct: 220 FVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHET 279
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK+
Sbjct: 280 TYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKV 331
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 306 bits (752), Expect = 5e-84
Identities = 143/172 (83%), Positives = 158/172 (91%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLS 219
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y+ALDFEQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET
Sbjct: 220 YIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHET 279
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK+
Sbjct: 280 TYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKV 331
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 305 bits (749), Expect = 1e-83
Identities = 142/172 (82%), Positives = 158/172 (91%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLS 219
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y+ALD+EQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET
Sbjct: 220 YIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHET 279
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK+
Sbjct: 280 TYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKV 331
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 296 bits (727), Expect = 5e-81
Identities = 134/172 (77%), Positives = 155/172 (90%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIKEKLC
Sbjct: 161 GVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLC 220
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y+A+D+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQ S +GME+ GIHET
Sbjct: 221 YIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHET 280
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEI ALAP ++KIK+
Sbjct: 281 TYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKV 332
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 257 bits (630), Expect = 3e-69
Identities = 116/171 (67%), Positives = 140/171 (81%)
Frame = +1
Query: 4 VSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 183
VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIKEKLCY
Sbjct: 150 VSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCY 209
Query: 184 VALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETV 363
VALD+EQEM +++K+Y LPDGQ ITI ERF CPE LFQPS +G ES GIHE
Sbjct: 210 VALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEAT 269
Query: 364 YNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
NSI+KC VD R+D+Y N +M+GGTTM GI +RM KE+ AL PS++K+K+
Sbjct: 270 RNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKV 320
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 256 bits (628), Expect = 5e-69
Identities = 122/172 (70%), Positives = 144/172 (83%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIKE+
Sbjct: 115 GVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQFG 171
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y+ALD+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHE
Sbjct: 172 YIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEK 231
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
YNSIMKCD DIRKDLY N V+SGGTTM+ GI +RM KEI ALA + ++IKI
Sbjct: 232 TYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKI 283
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 175 bits (426), Expect = 1e-44
Identities = 76/160 (47%), Positives = 113/160 (70%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
GV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IKEKLC
Sbjct: 159 GVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLC 218
Query: 181 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 360
Y++ D+++E +T L K+Y LPDG+VI +G ERF+ PEALF P + +E G+ +
Sbjct: 219 YISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADM 278
Query: 361 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI 480
V+ I + D+D R LY + V+SGG+TMYPG+ R++KEI
Sbjct: 279 VFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEI 318
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 93.5 bits (222), Expect = 8e-20
Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 43/215 (20%)
Frame = +1
Query: 1 GVSHTV-PIYEGYALPHAILRLDLAGRDLTDYLMKILTERG------YSF---------- 129
G S T+ P+++GY L A++ L G LTD L+K L +G YSF
Sbjct: 181 GGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEF 240
Query: 130 ---------TTTA-----EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQ 267
TT + +R IV DIK+ +C V + + + T+ SYELPDGQ
Sbjct: 241 QVEDVDIPDTTESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT---SYELPDGQ 297
Query: 268 VITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCDVDIRKDLY 411
+ IG +RF+ P+ +F PS + GME G+ V SI KCDVDIR++LY
Sbjct: 298 TLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRRELY 357
Query: 412 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 516
++ +++GGT+ + +R++K++ +P + ++K+
Sbjct: 358 SSILLAGGTSSMQQLKERLEKDLIEESPHSARVKV 392
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 87.4 bits (207), Expect = 5e-18
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Frame = +1
Query: 1 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
G +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +KE C
Sbjct: 182 GATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYC 241
Query: 181 YVALD----FEQEMATAAASTSLEKSYELPDGQVIT--IGNERFRCPEALFQPSFLGME- 339
Y D F + A K + G T +G ERF PE F P +
Sbjct: 242 YTCSDIVKEFNKHDKEPAKYIKQWKGVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDF 301
Query: 340 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTI 504
+ + + I +D R+ LY N V+SGG+TM+ R+Q+++ + + +
Sbjct: 302 TTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARV 356
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 87.0 bits (206), Expect = 7e-18
Identities = 59/167 (35%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Frame = +1
Query: 19 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 198
P+ EG A R +L G +LT + L + S + V +KE+ A
Sbjct: 152 PVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSMNLSMSD--VEKLKEQYANCA--- 206
Query: 199 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 378
E E+A + + LPDGQVI+IG ER+ EALFQPS LG+E GI E + I
Sbjct: 207 EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIIS 266
Query: 379 KCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI----TALAPSTIK 507
+ + L NTV+ GGTT G R QKE +A+ P+ +K
Sbjct: 267 TVSSENHRQLLENTVLCGGTTSMTGFESRFQKEANLCSSAIRPTLVK 313
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 79.0 bits (186), Expect = 2e-15
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Frame = +1
Query: 82 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 261
LT +L + + E SF + VR +KEKLCYVALD++ E+ S + S E+
Sbjct: 288 LTGFLKEKMQENNISFQSLYT---VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSG 339
Query: 262 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD-VDIRKD--LYANTVMSG 432
T+ ERF+ E LFQP GM + +H+ V + CD + D + V++G
Sbjct: 340 EGWFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTG 399
Query: 433 GTTMYPGIADRMQKEITALAPSTI 504
G+ PG+++R+++E+ PS+I
Sbjct: 400 GSACLPGLSERLERELQDHLPSSI 423
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 70.9 bits (166), Expect = 5e-13
Identities = 37/127 (29%), Positives = 67/127 (52%)
Frame = +1
Query: 136 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF 315
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 316 QPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAP 495
QP+ LGM G+ E + +I C ++ LY + +++GG+T++P + +R++ E+ L P
Sbjct: 308 QPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVP 367
Query: 496 STIKIKI 516
+KI
Sbjct: 368 DHFDVKI 374
Score = 70.1 bits (164), Expect = 8e-13
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 7 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 186
+H VP+ + L HAI R+DL G+ T+YL ++++ R S E +V D KEKLC+V
Sbjct: 164 THAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFV 221
Query: 187 ALDFEQEMATAAASTSLEKS-YELPDGQVITIG 282
+LD +++ A +L KS Y LPDG T G
Sbjct: 222 SLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 60.1 bits (139), Expect = 9e-10
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Frame = +1
Query: 142 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP---DGQVITIGNERFRCPEAL 312
E E+ R + +L + F Q++ + TS E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 313 FQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTTMYPGIADRMQKEIT 483
F P+ +G++ G+ E SI + + ++ + L ++ +M+GG ++ PG+ +R++ I
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERLECGIR 662
Query: 484 ALAPSTIKIKI 516
+ P I +
Sbjct: 663 MIRPCGSPINV 673
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +1
Query: 7 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 186
+H++P +G + R ++ G +TDYL ++L+ + ++ E D+K + CY+
Sbjct: 181 THSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYI 240
Query: 187 ALDFEQEM 210
A D+ E+
Sbjct: 241 APDYASEI 248
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 52.8 bits (121), Expect = 1e-07
Identities = 35/95 (36%), Positives = 50/95 (52%)
Frame = +1
Query: 82 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 261
LT +L + + E SF + VR +KEKLCYVALD++ E+ S + S E+
Sbjct: 288 LTGFLKEKMQENNISFQSLYT---VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSG 339
Query: 262 GQVITIGNERFRCPEALFQPSFLGMESCGIHETVY 366
T+ ERF+ E LFQP G+ +H+ VY
Sbjct: 340 EGWFTLSKERFQTGEILFQPRLAGII---VHKLVY 371
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 30.3 bits (65), Expect = 0.80
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 501
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPT 513
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 30.3 bits (65), Expect = 0.80
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 501
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPT 525
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 144 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 16
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 145 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 240
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 12 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 128
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 12 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 128
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 464 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 309
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 386 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 252
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 79 DLTDYL-MKILTERGYSFTTTAEREI-VRDIKEKLCY 183
D TD + +KI + T + ER I VRD+K+ +CY
Sbjct: 6 DFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICY 42
>At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel,
putative (CNGC11) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 588
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 464 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 309
L+ + G+++ D+ +A YR L M Y++ W + + WKR
Sbjct: 496 LTEVEGFVISADDLKFVATQYRRLHSKQLQHMFRFYSLQWQTWAACFIQAAWKR 549
>At2g06010.1 68415.m00657 expressed protein
Length = 188
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 339 FHTQEGRLEESLGTTEPLVTDGDHL 265
F+ GRLE SL E +VT D+L
Sbjct: 164 FNMSSGRLEASLDRVEAIVTHSDYL 188
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 345 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH 503
RH RD+ + + +HRH + Y D EG+HR R+ H
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKH 724
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 345 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH 503
RH RD+ + + +HRH + Y D EG+HR R+ H
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKH 724
>At5g35830.1 68418.m04305 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 282
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 186 DIAELLLDVTNDFPLSGGGERVTPL 112
+IA++L++ D P+ GG + TP+
Sbjct: 171 EIAKMLIEKNKDLPMIRGGGKTTPI 195
>At4g10290.1 68417.m01692 hypothetical protein
Length = 120
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 401 LRMSTSHFMMELYTVSWMPHDSIPRKEGWK 312
+R ++ + EL SW +S+PRK WK
Sbjct: 23 MRQTSDAKLAELGVTSWQLWESMPRKFPWK 52
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 5 SPTPYPSTKVTLCPTPSS 58
SPTP PST PTPS+
Sbjct: 278 SPTPTPSTPTPSTPTPST 295
>At1g69670.1 68414.m08018 cullin, putative contains similarity to
Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from
[Homo sapiens]; contains Pfam profile PF00888: Cullin
family
Length = 732
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 22 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 144
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 22 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 144
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,268,250
Number of Sequences: 28952
Number of extensions: 206917
Number of successful extensions: 737
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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