Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31882
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.40 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.40 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   2.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   4.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   4.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
 Frame = -3

Query: 280 NIVKSKCFFLFTSQTSGFFLDWFTFLLLAALFRKNEFGF*FRINFLDLVFRNICFEEIND 101
           N   SK   L+       F+ + ++ L   L   +     ++  +L ++F +  + E   
Sbjct: 35  NFRSSKLLILYNIILQVLFVSFVSYWLYLVLEADDMLPI-YKNTYLIILFADFAYLETTW 93

Query: 100 *ICSLL-----IE*ICRFLHFTTKCK 38
            IC+LL     +E   R +HF TKC+
Sbjct: 94  -ICTLLKKDKLLELFKRLIHFDTKCQ 118



 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 80   NQQAANSIINFLKTNVPKNEVQ 145
            NQQ    I+ +  TN+PK E +
Sbjct: 1273 NQQIGG-IVTYFSTNLPKRETE 1293


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
 Frame = -3

Query: 280 NIVKSKCFFLFTSQTSGFFLDWFTFLLLAALFRKNEFGF*FRINFLDLVFRNICFEEIND 101
           N   SK   L+       F+ + ++ L   L   +     ++  +L ++F +  + E   
Sbjct: 53  NFRSSKLLILYNIILQVLFVSFVSYWLYLVLEADDMLPI-YKNTYLIILFADFAYLETTW 111

Query: 100 *ICSLL-----IE*ICRFLHFTTKCK 38
            IC+LL     +E   R +HF TKC+
Sbjct: 112 -ICTLLKKDKLLELFKRLIHFDTKCQ 136


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 274 VKSKCFFLFTSQTSGFFLDWFTFLLLAAL 188
           +  K FF  T      F+D+F FLL + L
Sbjct: 378 ITGKNFFSITRGLILSFVDYFVFLLCSIL 406


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 218 LVYVFVACCAFSQKRVRFLIPNQF 147
           L+Y+ VACC      +   I N+F
Sbjct: 6   LIYLIVACCWGKSLSIPQQILNEF 29


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 390 LLFGSGTPSSIARTSVIYSNQILFICTTSSY 298
           L+FGSG+ +     SV+Y   IL+I  +  Y
Sbjct: 253 LIFGSGSATPENNVSVVYV-LILYILESLLY 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,787
Number of Sequences: 336
Number of extensions: 2863
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)