Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31882
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y18863-1|CAB39167.1| 220|Homo sapiens Pop4 protein protein. 63 5e-10
CR536569-1|CAG38806.1| 220|Homo sapiens POP4 protein. 63 5e-10
BC006098-1|AAH06098.1| 220|Homo sapiens processing of precursor... 63 5e-10
BC004438-1|AAH04438.1| 220|Homo sapiens processing of precursor... 63 5e-10
AF001176-1|AAD00893.2| 220|Homo sapiens ribonuclease P protein ... 62 1e-09
AK094515-1|BAC04372.1| 501|Homo sapiens protein ( Homo sapiens ... 29 7.3
AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch... 29 7.3
AC104600-1|AAY24051.1| 1270|Homo sapiens unknown protein. 29 7.3
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein. 29 7.3
>Y18863-1|CAB39167.1| 220|Homo sapiens Pop4 protein protein.
Length = 220
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/144 (25%), Positives = 77/144 (53%)
Frame = +2
Query: 83 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 262
Q+A + FLK + P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRSTPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 263 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 442
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 443 MLTVVRSKCPSFINKTGICIMDTK 514
+++V +SKCPS++ TGI + +TK
Sbjct: 139 IISVTKSKCPSYVGITGILLQETK 162
>CR536569-1|CAG38806.1| 220|Homo sapiens POP4 protein.
Length = 220
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/144 (25%), Positives = 77/144 (53%)
Frame = +2
Query: 83 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 262
Q+A + FLK + P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRSTPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 263 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 442
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 443 MLTVVRSKCPSFINKTGICIMDTK 514
+++V +SKCPS++ TGI + +TK
Sbjct: 139 IISVTKSKCPSYVGITGILLQETK 162
>BC006098-1|AAH06098.1| 220|Homo sapiens processing of precursor 4,
ribonuclease P/MRP subunit (S. cerevisiae) protein.
Length = 220
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/144 (25%), Positives = 77/144 (53%)
Frame = +2
Query: 83 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 262
Q+A + FLK + P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRSTPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 263 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 442
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 443 MLTVVRSKCPSFINKTGICIMDTK 514
+++V +SKCPS++ TGI + +TK
Sbjct: 139 IISVTKSKCPSYVGITGILLQETK 162
>BC004438-1|AAH04438.1| 220|Homo sapiens processing of precursor 4,
ribonuclease P/MRP subunit (S. cerevisiae) protein.
Length = 220
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/144 (25%), Positives = 77/144 (53%)
Frame = +2
Query: 83 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 262
Q+A + FLK + P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRSTPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 263 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 442
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 443 MLTVVRSKCPSFINKTGICIMDTK 514
+++V +SKCPS++ TGI + +TK
Sbjct: 139 IISVTKSKCPSYVGITGILLQETK 162
>AF001176-1|AAD00893.2| 220|Homo sapiens ribonuclease P protein
subunit p29 protein.
Length = 220
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/144 (25%), Positives = 76/144 (52%)
Frame = +2
Query: 83 QQAANSIINFLKTNVPKNEVQKIDSELKTELVFAXXXXXXXXXXXXXXXTRCLTRKEKKT 262
Q+A + FLK P+ Q + +L+ + V + L+ ++++
Sbjct: 25 QRAEAFVRAFLKRTSPRMSPQAREDQLQRKAV-VLEYFTRHKRKEKKKKAKGLSARQRRE 83
Query: 263 LRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGC 442
LR ++I +Y + ++++W +YI ++ + G+ +P+++ + + L KAD HG
Sbjct: 84 LRLFDIKPEQQRYSLFLPLHELWKQYIRDLCS---GL-KPDTQP-QMIQAKLLKADLHGA 138
Query: 443 MLTVVRSKCPSFINKTGICIMDTK 514
+++V +SKCPS++ TGI + +TK
Sbjct: 139 IISVTKSKCPSYVGITGILLQETK 162
>AK094515-1|BAC04372.1| 501|Homo sapiens protein ( Homo sapiens
cDNA FLJ37196 fis, clone BRALZ2005888. ).
Length = 501
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 251 EKKTLRFYNIPRHSVKYEDVVQMNKIWLEYITEVL 355
EK LR+Y H + + V M WLE++ +++
Sbjct: 158 EKDILRYYYYIHHGIDTDHVAPMEDSWLEHVLDLV 192
>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain
7 protein.
Length = 4024
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 251 EKKTLRFYNIPRHSVKYEDVVQMNKIWLEYITEVL 355
EK LR+Y H + + V M WLE++ +++
Sbjct: 158 EKDILRYYYYIHHGIDTDHVAPMEDSWLEHVLDLV 192
>AC104600-1|AAY24051.1| 1270|Homo sapiens unknown protein.
Length = 1270
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 251 EKKTLRFYNIPRHSVKYEDVVQMNKIWLEYITEVL 355
EK LR+Y H + + V M WLE++ +++
Sbjct: 153 EKDILRYYYYIHHGIDTDHVAPMEDSWLEHVLDLV 187
>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
Length = 4031
Score = 29.5 bits (63), Expect = 7.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 251 EKKTLRFYNIPRHSVKYEDVVQMNKIWLEYITEVL 355
EK LR+Y H + + V M WLE++ +++
Sbjct: 165 EKDILRYYYYIHHGIDTDHVAPMEDSWLEHVLDLV 199
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,249,585
Number of Sequences: 237096
Number of extensions: 1563405
Number of successful extensions: 2420
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2415
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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