Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31882
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81034-5|CAB02730.1|  198|Caenorhabditis elegans Hypothetical pr...    42   3e-04
Z66498-5|CAA91294.2|  513|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z54327-14|CAA91124.2|  513|Caenorhabditis elegans Hypothetical p...    29   1.5  
Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical ...    28   3.4  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    28   3.4  
U29537-9|AAK31506.2|  161|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U29537-8|ABS83848.1|  258|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF040645-14|AAB94979.1|  779|Caenorhabditis elegans Hypothetical...    27   8.0  

>Z81034-5|CAB02730.1|  198|Caenorhabditis elegans Hypothetical
           protein C15C6.4 protein.
          Length = 198

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 22/77 (28%), Positives = 42/77 (54%)
 Frame = +2

Query: 284 RHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLSLYKADYHGCMLTVVRS 463
           + + K+ D+V MN  W +Y  E L         N  +   +  ++ K+DYHG +LT+  +
Sbjct: 57  KKAFKFADIVPMNTDWQKYFRERLG--------NHFSSTKIEKTILKSDYHGALLTIWLA 108

Query: 464 KCPSFINKTGICIMDTK 514
           + P+ I  +GI +++T+
Sbjct: 109 ENPTQIGISGIVVLETR 125


>Z66498-5|CAA91294.2|  513|Caenorhabditis elegans Hypothetical
           protein C26D10.6a protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 386 SKNWETLTLSLYKADYHGCMLTVVRSK 466
           S+NWE++ L  Y   YHG  ++ V+ +
Sbjct: 261 SRNWESMLLGTYHRVYHGSWISSVKGR 287


>Z54327-14|CAA91124.2|  513|Caenorhabditis elegans Hypothetical
           protein C26D10.6a protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 386 SKNWETLTLSLYKADYHGCMLTVVRSK 466
           S+NWE++ L  Y   YHG  ++ V+ +
Sbjct: 261 SRNWESMLLGTYHRVYHGSWISSVKGR 287


>Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical
           protein F20E11.1 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = -1

Query: 252 SLRVKHLVFFLIGLRFCCLLRFFAKTSSVFNS--ESIFWTS--FLGTFVLRKLMIEFAA 88
           S+++KHL F +I   F C +    K ++ F +  +++ W    FL T+ +  +++  +A
Sbjct: 147 SIKIKHLYFVIIAKDFSCFVFTVWKRNAAFQTVFQNLTWVDFFFLMTWCINDIIVFISA 205


>AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical
           protein W09B6.1b protein.
          Length = 813

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 38  LTFRCKMEETTDSFNQQAANSIINFLKTN 124
           + +RC  EET +++     N II F K N
Sbjct: 656 IVYRCAFEETKEAYKVTVNNEIITFEKDN 684


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
           protein W09B6.1a protein.
          Length = 2054

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 38  LTFRCKMEETTDSFNQQAANSIINFLKTN 124
           + +RC  EET +++     N II F K N
Sbjct: 656 IVYRCAFEETKEAYKVTVNNEIITFEKDN 684


>U29537-9|AAK31506.2|  161|Caenorhabditis elegans Hypothetical
           protein F28B12.1a protein.
          Length = 161

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 257 KTLRFYNIPRHSVKYEDVVQMNKIWLEYI 343
           +TLR  N+P     YED +   KI+LE I
Sbjct: 76  RTLRCVNLPELVEHYEDQLTAQKIYLEKI 104


>U29537-8|ABS83848.1|  258|Caenorhabditis elegans Hypothetical
           protein F28B12.1b protein.
          Length = 258

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 257 KTLRFYNIPRHSVKYEDVVQMNKIWLEYI 343
           +TLR  N+P     YED +   KI+LE I
Sbjct: 173 RTLRCVNLPELVEHYEDQLTAQKIYLEKI 201


>AF040645-14|AAB94979.1|  779|Caenorhabditis elegans Hypothetical
           protein F52C6.14 protein.
          Length = 779

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 41  TFRCKMEETTDSFNQQAANSIINFLKTN 124
           ++  +ME     +     NSIINFLK N
Sbjct: 536 SYNVRMEGDNKEYTHSRCNSIINFLKEN 563


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,126,454
Number of Sequences: 27780
Number of extensions: 258816
Number of successful extensions: 726
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)