Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31882
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    24   0.81 
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    24   0.81 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   3.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   4.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   4.3  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   7.5  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   7.5  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   10.0 
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   10.0 

>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 83  QQAANSIINFLKTNVPKN 136
           +  AN ++N+LKT  PK+
Sbjct: 80  KHTANKVVNYLKTKRPKD 97


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 83  QQAANSIINFLKTNVPKN 136
           +  AN ++N+LKT  PK+
Sbjct: 80  KHTANKVVNYLKTKRPKD 97


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 27  IKRVLHFVVKWRKRQIHSINRLQIQSLISSKQMFLKTRSKK 149
           ++R+  F      RQ++S  +  IQSL+  K    K  +KK
Sbjct: 717 LQRMAEFTKLDTNRQVNSAVKSTIQSLMKLKSPEWKDLAKK 757


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 275 NIPRHSVKYEDVVQMNKIWLEYITEV 352
           N   H+V+ +DVVQ + + +  I EV
Sbjct: 379 NYTCHAVRNQDVVQTHVLTIHTIPEV 404


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 209 VFVACCAFSQKRVRFLIPNQFFGPRF 132
           +FV C   +   V  L+    FGPRF
Sbjct: 72  LFVGCLVMTFAGVNDLLGYWVFGPRF 97


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 372 TPSSIARTSVIYSN 331
           TPS  ++TSV YSN
Sbjct: 361 TPSKCSQTSVHYSN 374


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 461 SKCPSFINKTGICI 502
           S+CP  I+K+ IC+
Sbjct: 478 SRCPPEIHKSCICV 491


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 461 SKCPSFINKTGICI 502
           S+CP  I+K+ IC+
Sbjct: 478 SRCPPEIHKSCICV 491


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 296 SRCVVEYCKIEV 261
           SRCV++Y K  +
Sbjct: 118 SRCVIDYVKFHI 129


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 166 NRTRFCEKAQQATK 207
           N+  FC+K ++ATK
Sbjct: 5   NQDTFCKKMRKATK 18


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,152
Number of Sequences: 438
Number of extensions: 3327
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)